RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 RAB38P57729 211 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 BTN3A2P78410 334 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 ACVR1Q04771 509 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 CDH17Q12864 832 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 RPS6KA2Q15349 733 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 NTRK2Q16620 822 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 PARP6Q2NL67 630 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 BBS12Q6ZW61 710 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 MTDHQ86UE4 582 aaKnown RBP8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 ZNF525Q8N782 197 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 TMEM52Q8NDY8 209 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 MCUQ8NE86 351 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 SEMA6DQ8NFY4 1073 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 OR52K1Q8NGK4 314 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 KAT2AQ92830 837 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 ZNF778Q96MU6 729 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 HAUS8Q9BT25 410 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 TRAF4Q9BUZ4 470 aaPredicted RBP8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 ALOXE3Q9BYJ1 711 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 FANCFQ9NPI8 374 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 FETUBQ9UGM5 382 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 PTBP2Q9UKA9 531 aaKnown RBP8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 DLGAP4Q9Y2H0 992 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 PCDHA9Q9Y5H5 950 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 A0A088AWK7 358 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 MYOCOSA0A1B0GUC4 107 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 SLC22A20A6NK97 555 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 CAPN14A8MX76 684 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 PFDN6O15212 129 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 PSMD3O43242 534 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 EMC8O43402 210 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 PSTPIP1O43586 416 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 ESR1P03372 595 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 CSF3P09919 207 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 ZNF10P21506 573 aaPredicted RBP8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 ADRA1DP25100 572 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 AHRP35869 848 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 KIR2DL2P43627 348 aaPredicted RBP8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 GFRA1P56159 465 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 ARL4CP56559 192 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 SCAND1P57086 179 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 EIF3EP60228 445 aaKnown RBP8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 RPP38P78345 283 aaKnown RBP8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 SERTAD2Q14140 314 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 RCN2Q14257 317 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 PGGHGQ32M88 737 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 ZNF672Q499Z4 452 aaPredicted RBP8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 TOR1AIP1Q5JTV8 583 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 RNF220Q5VTB9 566 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 BICRALQ6AI39 1079 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 AAGABQ6PD74 315 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 SHISA2Q6UWI4 295 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 LCTLQ6UWM7 567 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 SLC29A4Q7RTT9 530 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 IFNEQ86WN2 208 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 C9orf40Q8IXQ3 194 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 TAGAPQ8N103 731 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 ZNF610Q8N9Z0 462 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 TRPV3Q8NET8 790 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 ABHD11Q8NFV4 315 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 OR14L1PQ8NHC6 308 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 LILRB1Q8NHL6 650 aaPredicted RBP8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 ACTL9Q8TC94 416 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 ZNF721Q8TF20 911 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 PEX13Q92968 403 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 MSI2Q96DH6 328 aaKnown RBP8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 RCC1LQ96I51 464 aaKnown RBP8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 NSUN5Q96P11 429 aaKnown RBP8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 G6PC3Q9BUM1 346 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 NPLQ9BXD5 320 aaPredicted RBP8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 HEMGNQ9BXL5 484 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 PACSIN1Q9BY11 444 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 ACTR6Q9GZN1 396 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 TEX10Q9NXF1 929 aaPredicted RBP8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 SLC13A4Q9UKG4 626 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 RNF112Q9ULX5 631 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 B3GALT5Q9Y2C3 310 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 EMC9Q9Y3B6 208 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 HYOU1Q9Y4L1 999 aa8.63□□□□□ -1.03
SMARCAL1-213ENST00000496037 VWFP04275 2813 aa8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 HCRTR2O43614 444 aa8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 B3GALT2O43825 422 aa8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 CTNSO60931 367 aa8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 METTL18O95568 372 aa8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 ETHE1O95571 254 aa8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 TGFAP01135 160 aa8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 ALDOAP04075 364 aaKnown RBP8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 TMEM253P0C7T8 217 aa8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 SMIM10L1P0DMW3 83 aa8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 APEHP13798 732 aaKnown RBP8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 GRK2P25098 689 aa8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 TMED10P49755 219 aaKnown RBP8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 STXBP1P61764 594 aaKnown RBP8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 FUT7Q11130 342 aa8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 NAE1Q13564 534 aa8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 GGTLC2Q14390 218 aa8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 EFTUD2Q15029 972 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 FNDC7Q5VTL7 733 aa8.62□□□□□ -1.03
SMARCAL1-213ENST00000496037 TIGD3Q6B0B8 471 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms