RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 UGT1A1P22309 533 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 UGT1A4P22310 534 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 PTAFRP25105 342 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 ACADLP28330 430 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 ATP5DP30049 168 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 ADRA1AP35348 466 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 SSR1P43307 286 aaKnown RBP3.99□□□□□ -1.77
VPS52-222ENST00000495981 CLK1P49759 484 aaKnown RBP3.99□□□□□ -1.77
VPS52-222ENST00000495981 RPS15P62841 145 aaKnown RBP3.99□□□□□ -1.77
VPS52-222ENST00000495981 DYNLT1P63172 113 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 Q0VFX4 171 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 AP1B1Q10567 949 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 XRCC4Q13426 336 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 ITGA9Q13797 1035 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 PDK1Q15118 436 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 SLC1A5Q15758 541 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 HIST2H2ACQ16777 129 aaPredicted RBP3.99□□□□□ -1.77
VPS52-222ENST00000495981 DEFB110Q30KQ9 67 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 ANXA2RQ3ZCQ2 193 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 CDONQ4KMG0 1287 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 SYTL3Q4VX76 610 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 GLE1Q53GS7 698 aaKnown RBP3.99□□□□□ -1.77
VPS52-222ENST00000495981 TEX44Q53QW1 395 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 PLAC9Q5JTB6 97 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 PCID2Q5JVF3 399 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 LDLRAP1Q5SW96 308 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 FNBP1LQ5T0N5 605 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 ABHD17BQ5VST6 288 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 LRRC38Q5VT99 294 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 ZDHHC20Q5W0Z9 365 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 CAVIN1Q6NZI2 390 aaKnown RBP3.99□□□□□ -1.77
VPS52-222ENST00000495981 MFSD7Q6UXD7 560 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 NAPRTQ6XQN6 538 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 Q6ZNX1 250 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 Q6ZS92 163 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 NOXA1Q86UR1 476 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 LUZP1Q86V48 1076 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 IQCKQ8N0W5 287 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 ZNF567Q8N184 647 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 ACBD4Q8NC06 268 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 ST6GALNAC3Q8NDV1 305 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 ACVR1CQ8NER5 493 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 IPMKQ8NFU5 416 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 OR52E1Q8NGJ3 308 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 BLOC1S5Q8TDH9 187 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 PTPMT1Q8WUK0 201 aaPredicted RBP3.99□□□□□ -1.77
VPS52-222ENST00000495981 CTNNBL1Q8WYA6 563 aaPredicted RBP3.99□□□□□ -1.77
VPS52-222ENST00000495981 FCRL5Q96RD9 977 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 SLX1AQ9BQ83 275 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 MLST8Q9BVC4 326 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 MRPL1Q9BYD6 325 aaKnown RBP3.99□□□□□ -1.77
VPS52-222ENST00000495981 TRIM2Q9C040 744 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 XPO4Q9C0E2 1151 aaKnown RBP3.99□□□□□ -1.77
VPS52-222ENST00000495981 HRH4Q9H3N8 390 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 GOLPH3Q9H4A6 298 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 COG4Q9H9E3 785 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 ACTR5Q9H9F9 607 aaPredicted RBP3.99□□□□□ -1.77
VPS52-222ENST00000495981 UGT1A7Q9HAW7 530 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 UGT1A10Q9HAW8 530 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 UGT1A8Q9HAW9 530 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 FANCEQ9HB96 536 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 MCCC2Q9HCC0 563 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 ZNF304Q9HCX3 659 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 FAM60AQ9NP50 221 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 AURKAIP1Q9NWT8 199 aaPredicted RBP3.99□□□□□ -1.77
VPS52-222ENST00000495981 HRASLS2Q9NWW9 162 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 CHCHD3Q9NX63 227 aaKnown RBP3.99□□□□□ -1.77
VPS52-222ENST00000495981 CRNNQ9UBG3 495 aaPredicted RBP3.99□□□□□ -1.77
VPS52-222ENST00000495981 FAM153AQ9UHL3 310 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 LCMT1Q9UIC8 334 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 ANAPC5Q9UJX4 755 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 PLAGL1Q9UM63 463 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 FARSAQ9Y285 508 aaKnown RBP3.99□□□□□ -1.77
VPS52-222ENST00000495981 HYOU1Q9Y4L1 999 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 ARL5AQ9Y689 179 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 BZW2Q9Y6E2 419 aaKnown RBP3.99□□□□□ -1.77
VPS52-222ENST00000495981 TRRAPQ9Y4A5 3859 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 HIVEP2P31629 2446 aa3.99□□□□□ -1.77
VPS52-222ENST00000495981 GSAPA4D1B5 854 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 TMEM247A6NEH6 219 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 HSPB2A8KAH6 182 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 C9J4A7 227 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 FAM157AC9JC47 383 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 EBAG9O00559 213 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 ZNF749O43361 778 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 PSTPIP1O43586 416 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 LDB2O43679 373 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 KLK8O60259 260 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 FMO6PO60774 539 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 ALOX12BO75342 701 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 NDUFS3O75489 264 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 SRP72O76094 671 aaKnown RBP3.98□□□□□ -1.77
VPS52-222ENST00000495981 SLCO2B1O94956 709 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 EPOP01588 193 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 CCDC175P0C221 793 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 PRSS56P0CW18 603 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 CBSLP0DN79 551 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 UGT2B7P16662 529 aa3.98□□□□□ -1.77
VPS52-222ENST00000495981 POLR2CP19387 275 aaPredicted RBP3.98□□□□□ -1.77
VPS52-222ENST00000495981 AGAP20933 346 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms