RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 CISD2Q8N5K1 135 aaKnown RBP17.95■□□□□ 0.46
HDAC4-212ENST00000495497 SLC22A8Q8TCC7 542 aa17.95■□□□□ 0.46
HDAC4-212ENST00000495497 TP53INP1Q96A56 240 aa17.95■□□□□ 0.46
HDAC4-212ENST00000495497 CCDC28BQ9BUN5 200 aa17.95■□□□□ 0.46
HDAC4-212ENST00000495497 SIRT3Q9NTG7 399 aaPredicted RBP17.95■□□□□ 0.46
HDAC4-212ENST00000495497 PRODH2Q9UF12 536 aa17.95■□□□□ 0.46
HDAC4-212ENST00000495497 MAPRE3Q9UPY8 281 aa17.95■□□□□ 0.46
HDAC4-212ENST00000495497 ERVK-11Q9UQG0 969 aa17.95■□□□□ 0.46
HDAC4-212ENST00000495497 CFL2Q9Y281 166 aa17.95■□□□□ 0.46
HDAC4-212ENST00000495497 SLC25A12O75746 678 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 SLITRK5O94991 958 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 SP1P08047 785 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 ABCB1P08183 1280 aaPredicted RBP17.94■□□□□ 0.46
HDAC4-212ENST00000495497 DGKQP52824 942 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 CLNS1AP54105 237 aaKnown RBP17.94■□□□□ 0.46
HDAC4-212ENST00000495497 PRKAG1P54619 331 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 GYS2P54840 703 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 CORO7P57737 925 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 ZNF155Q12901 538 aaPredicted RBP17.94■□□□□ 0.46
HDAC4-212ENST00000495497 MLC1Q15049 377 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 GSTA3Q16772 222 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 FAM174BQ3ZCQ3 159 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 SLC25A25Q6KCM7 469 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 PAOXQ6QHF9 649 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 NPSR1Q6W5P4 371 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 ANKRD46Q86W74 232 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 OR5P2Q8WZ92 322 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 TESCQ96BS2 214 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 LCORQ96JN0 433 aaPredicted RBP17.94■□□□□ 0.46
HDAC4-212ENST00000495497 VSTM2LQ96N03 204 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 CCDC134Q9H6E4 229 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 CXorf36Q9H7Y0 433 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 TAS2R9Q9NYW1 312 aa17.94■□□□□ 0.46
HDAC4-212ENST00000495497 A0A0G2JND7 137 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 CFLARO15519 480 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 SLC28A2O43868 658 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 SCN2BO60939 215 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 COQ9O75208 318 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 PSMG1O95456 288 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 CD46P15529 392 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 KIR3DL1P43629 444 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 PMP22Q01453 160 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 MAPKAPK3Q16644 382 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 OPN5Q6U736 354 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 SZRD1Q7Z422 152 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 GALNTL5Q7Z4T8 443 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 TAGAPQ8N103 731 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 SLC15A4Q8N697 577 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 NATD1Q8N6N6 113 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 HORMAD2Q8N7B1 307 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 NUP43Q8NFH3 380 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 OR8J2Q8NGG1 315 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 OR5M3Q8NGP4 307 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 OR9I1Q8NGQ6 314 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 SCMH1Q96GD3 660 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 C5orf34Q96MH7 638 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 EQTNQ9NQ60 294 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 NTNG1Q9Y2I2 539 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 GPR55Q9Y2T6 319 aaPredicted RBP17.93■□□□□ 0.46
HDAC4-212ENST00000495497 SNX8Q9Y5X2 465 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 NPFFR2Q9Y5X5 522 aa17.93■□□□□ 0.46
HDAC4-212ENST00000495497 CDK2AP1O14519 115 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 EMC8O43402 210 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 ERN1O75460 977 aaKnown RBP17.92■□□□□ 0.46
HDAC4-212ENST00000495497 SLC22A3O75751 556 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 CPSF4O95639 269 aaKnown RBP17.92■□□□□ 0.46
HDAC4-212ENST00000495497 FBXO45P0C2W1 286 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 CT45A8P0DMV1 189 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 CT45A9P0DMV2 189 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 S100A3P33764 101 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 PPICP45877 212 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 ZFP36L2P47974 494 aaKnown RBP17.92■□□□□ 0.46
HDAC4-212ENST00000495497 HBA1P69905 142 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 INPP5JQ15735 1006 aaPredicted RBP17.92■□□□□ 0.46
HDAC4-212ENST00000495497 ZNF791Q3KP31 576 aaPredicted RBP17.92■□□□□ 0.46
HDAC4-212ENST00000495497 CT45A2Q5DJT8 189 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 DESI1Q6ICB0 168 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 SLC44A2Q8IWA5 706 aaPredicted RBP17.92■□□□□ 0.46
HDAC4-212ENST00000495497 GPALPP1Q8IXQ4 340 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 CLEC4FQ8N1N0 589 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 C17orf47Q8NEP4 570 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 OR4N2Q8NGD1 307 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 TMEM125Q96AQ2 219 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 SNRNP40Q96DI7 357 aaKnown RBP17.92■□□□□ 0.46
HDAC4-212ENST00000495497 SPACA9Q96E40 222 aaPredicted RBP17.92■□□□□ 0.46
HDAC4-212ENST00000495497 FAM120BQ96EK7 910 aaKnown RBP17.92■□□□□ 0.46
HDAC4-212ENST00000495497 RILPQ96NA2 401 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 TAAR6Q96RI8 345 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 ZBTB18Q99592 522 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 TMEM120AQ9BXJ8 343 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 TRIM4Q9C037 500 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 SDR39U1Q9NRG7 319 aaPredicted RBP17.92■□□□□ 0.46
HDAC4-212ENST00000495497 ZIM2Q9NZV7 527 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 MAP10Q9P2G4 905 aa17.92■□□□□ 0.46
HDAC4-212ENST00000495497 CNTRLQ7Z7A1 2325 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 FRG2CA6NGY1 282 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 G3V3Y1 287 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 RNASET2O00584 256 aaKnown RBP17.91■□□□□ 0.46
HDAC4-212ENST00000495497 NME2P1O60361 137 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms