RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 PRSS12P56730 875 aa8.79□□□□□ -1
MSH5-218ENST00000494646 TFF3Q07654 80 aa8.79□□□□□ -1
MSH5-218ENST00000494646 C2orf80Q0P641 193 aa8.79□□□□□ -1
MSH5-218ENST00000494646 SNTB1Q13884 538 aaKnown RBP8.79□□□□□ -1
MSH5-218ENST00000494646 RPS6KA2Q15349 733 aa8.79□□□□□ -1
MSH5-218ENST00000494646 EIPR1Q53HC9 387 aa8.79□□□□□ -1
MSH5-218ENST00000494646 SPDYAQ5MJ70 313 aa8.79□□□□□ -1
MSH5-218ENST00000494646 C1orf185Q5T7R7 199 aa8.79□□□□□ -1
MSH5-218ENST00000494646 FNDC7Q5VTL7 733 aa8.79□□□□□ -1
MSH5-218ENST00000494646 PACS2Q86VP3 889 aa8.79□□□□□ -1
MSH5-218ENST00000494646 SLC22A9Q8IVM8 553 aa8.79□□□□□ -1
MSH5-218ENST00000494646 LRRC25Q8N386 305 aaPredicted RBP8.79□□□□□ -1
MSH5-218ENST00000494646 VWA5B2Q8N398 1253 aa8.79□□□□□ -1
MSH5-218ENST00000494646 CDC26Q8NHZ8 85 aa8.79□□□□□ -1
MSH5-218ENST00000494646 NEIL3Q8TAT5 605 aa8.79□□□□□ -1
MSH5-218ENST00000494646 C16orf78Q8WTQ4 265 aa8.79□□□□□ -1
MSH5-218ENST00000494646 MZB1Q8WU39 189 aa8.79□□□□□ -1
MSH5-218ENST00000494646 KAT2AQ92830 837 aa8.79□□□□□ -1
MSH5-218ENST00000494646 EXOSC8Q96B26 276 aaKnown RBP8.79□□□□□ -1
MSH5-218ENST00000494646 TRIM44Q96DX7 344 aaPredicted RBP8.79□□□□□ -1
MSH5-218ENST00000494646 OMA1Q96E52 524 aa8.79□□□□□ -1
MSH5-218ENST00000494646 LCORQ96JN0 433 aaPredicted RBP8.79□□□□□ -1
MSH5-218ENST00000494646 ZNF681Q96N22 645 aa8.79□□□□□ -1
MSH5-218ENST00000494646 NODALQ96S42 347 aa8.79□□□□□ -1
MSH5-218ENST00000494646 ZNF382Q96SR6 550 aa8.79□□□□□ -1
MSH5-218ENST00000494646 FAIM2Q9BWQ8 316 aa8.79□□□□□ -1
MSH5-218ENST00000494646 EBPLQ9BY08 206 aa8.79□□□□□ -1
MSH5-218ENST00000494646 ANGPTL4Q9BY76 406 aa8.79□□□□□ -1
MSH5-218ENST00000494646 ACPTQ9BZG2 426 aa8.79□□□□□ -1
MSH5-218ENST00000494646 SHCBP1LQ9BZQ2 653 aa8.79□□□□□ -1
MSH5-218ENST00000494646 C12orf65Q9H3J6 166 aaKnown RBP8.79□□□□□ -1
MSH5-218ENST00000494646 ACKR4Q9NPB9 350 aa8.79□□□□□ -1
MSH5-218ENST00000494646 PSMC3IPQ9P2W1 217 aaPredicted RBP8.79□□□□□ -1
MSH5-218ENST00000494646 ZNF639Q9UID6 485 aa8.79□□□□□ -1
MSH5-218ENST00000494646 MCM8Q9UJA3 840 aa8.79□□□□□ -1
MSH5-218ENST00000494646 EMCNQ9ULC0 261 aa8.79□□□□□ -1
MSH5-218ENST00000494646 PLLPQ9Y342 182 aa8.79□□□□□ -1
MSH5-218ENST00000494646 SLC6A5Q9Y345 797 aa8.79□□□□□ -1
MSH5-218ENST00000494646 ANKRD33BA6NCL7 494 aa8.78□□□□□ -1
MSH5-218ENST00000494646 G3V2L1 256 aa8.78□□□□□ -1
MSH5-218ENST00000494646 UBFD1O14562 309 aaKnown RBP8.78□□□□□ -1
MSH5-218ENST00000494646 WDR1O75083 606 aa8.78□□□□□ -1
MSH5-218ENST00000494646 REM1O75628 298 aa8.78□□□□□ -1
MSH5-218ENST00000494646 PPM1BO75688 479 aa8.78□□□□□ -1
MSH5-218ENST00000494646 SNX4O95219 450 aa8.78□□□□□ -1
MSH5-218ENST00000494646 ATP1B1P05026 303 aa8.78□□□□□ -1
MSH5-218ENST00000494646 GSTA1P08263 222 aa8.78□□□□□ -1
MSH5-218ENST00000494646 MYL2P10916 166 aa8.78□□□□□ -1
MSH5-218ENST00000494646 HSD3B1P14060 373 aa8.78□□□□□ -1
MSH5-218ENST00000494646 PCSK2P16519 638 aa8.78□□□□□ -1
MSH5-218ENST00000494646 ELAVL4P26378 380 aaKnown RBP8.78□□□□□ -1
MSH5-218ENST00000494646 HSD3B2P26439 372 aa8.78□□□□□ -1
MSH5-218ENST00000494646 EMDP50402 254 aa8.78□□□□□ -1
MSH5-218ENST00000494646 TRA2BP62995 288 aaKnown RBP8.78□□□□□ -1
MSH5-218ENST00000494646 RPP38P78345 283 aaKnown RBP8.78□□□□□ -1
MSH5-218ENST00000494646 ACSM2AQ08AH3 577 aa8.78□□□□□ -1
MSH5-218ENST00000494646 CSTF3Q12996 717 aaKnown RBP8.78□□□□□ -1
MSH5-218ENST00000494646 LCP2Q13094 533 aa8.78□□□□□ -1
MSH5-218ENST00000494646 PRSS53Q2L4Q9 553 aa8.78□□□□□ -1
MSH5-218ENST00000494646 WIPI1Q5MNZ9 446 aaPredicted RBP8.78□□□□□ -1
MSH5-218ENST00000494646 TBCELQ5QJ74 424 aa8.78□□□□□ -1
MSH5-218ENST00000494646 ACSM2BQ68CK6 577 aa8.78□□□□□ -1
MSH5-218ENST00000494646 NUP54Q7Z3B4 507 aa8.78□□□□□ -1
MSH5-218ENST00000494646 WDR53Q7Z5U6 358 aaPredicted RBP8.78□□□□□ -1
MSH5-218ENST00000494646 YRDCQ86U90 279 aaKnown RBP8.78□□□□□ -1
MSH5-218ENST00000494646 ULK2Q8IYT8 1036 aa8.78□□□□□ -1
MSH5-218ENST00000494646 CCDC63Q8NA47 563 aa8.78□□□□□ -1
MSH5-218ENST00000494646 OR1J4Q8NGS1 313 aa8.78□□□□□ -1
MSH5-218ENST00000494646 RDH11Q8TC12 318 aa8.78□□□□□ -1
MSH5-218ENST00000494646 ACMSDQ8TDX5 336 aa8.78□□□□□ -1
MSH5-218ENST00000494646 UBLCP1Q8WVY7 318 aaPredicted RBP8.78□□□□□ -1
MSH5-218ENST00000494646 TMBIM1Q969X1 311 aa8.78□□□□□ -1
MSH5-218ENST00000494646 CTHRC1Q96CG8 243 aa8.78□□□□□ -1
MSH5-218ENST00000494646 L3HYPDHQ96EM0 354 aa8.78□□□□□ -1
MSH5-218ENST00000494646 HSPBAP1Q96EW2 488 aa8.78□□□□□ -1
MSH5-218ENST00000494646 ZNF597Q96LX8 424 aa8.78□□□□□ -1
MSH5-218ENST00000494646 TIMP4Q99727 224 aa8.78□□□□□ -1
MSH5-218ENST00000494646 GSTO2Q9H4Y5 243 aa8.78□□□□□ -1
MSH5-218ENST00000494646 METTL7AQ9H8H3 244 aa8.78□□□□□ -1
MSH5-218ENST00000494646 QPCTLQ9NXS2 382 aa8.78□□□□□ -1
MSH5-218ENST00000494646 B4GALT7Q9UBV7 327 aa8.78□□□□□ -1
MSH5-218ENST00000494646 CAMK2AQ9UQM7 478 aa8.78□□□□□ -1
MSH5-218ENST00000494646 CFL2Q9Y281 166 aa8.78□□□□□ -1
MSH5-218ENST00000494646 DOCK7Q96N67 2140 aa8.78□□□□□ -1
MSH5-218ENST00000494646 ZNF469Q96JG9 3925 aaPredicted RBP8.78□□□□□ -1
MSH5-218ENST00000494646 MED12LQ86YW9 2145 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 ICOSLGO75144 302 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 UGT2B11O75310 529 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 HPNP05981 417 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 HOXD4P09016 255 aaPredicted RBP8.77□□□□□ -1.01
MSH5-218ENST00000494646 ANXA4P09525 319 aaPredicted RBP8.77□□□□□ -1.01
MSH5-218ENST00000494646 DRD2P14416 443 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 GABRA1P14867 456 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 POU3F2P20265 443 aaPredicted RBP8.77□□□□□ -1.01
MSH5-218ENST00000494646 MSX1P28360 303 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 TIA1P31483 386 aaKnown RBP eCLIP8.77□□□□□ -1.01
MSH5-218ENST00000494646 PTGDSP41222 190 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 PPICP45877 212 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 TMED10P49755 219 aaKnown RBP8.77□□□□□ -1.01
MSH5-218ENST00000494646 CDK9P50750 372 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms