RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 RAB44Q7Z6P3 723 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 IQCHQ86VS3 1027 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 PELI3Q8N2H9 469 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 PQLC1Q8N2U9 271 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 ZNF786Q8N393 782 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 POC5Q8NA72 575 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 OR4M1Q8NGD0 313 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 C22orf15Q8WYQ4 148 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 OR1E3Q8WZA6 343 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 AP2M1Q96CW1 435 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 BSCL2Q96G97 398 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 C14orf144Q96I85 54 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 TTYH2Q9BSA4 534 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 ZDHHC5Q9C0B5 715 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 SEBOXQ9HB31 216 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 IL21RQ9HBE5 538 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 BPIFA1Q9NP55 256 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 MYEF2Q9P2K5 600 aaKnown RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 POLR3HQ9Y535 204 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 HS3ST3A1Q9Y663 406 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 CEP250Q9BV73 2442 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 MEIOCA2RUB1 952 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 C4orf47A7E2U8 309 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 CTAG2O75638 210 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 UBXN7O94888 489 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 SLC2A1P11166 492 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 CTSKP43235 329 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 GRK6P43250 576 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 GPR1P46091 355 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 RPS5P46782 204 aaKnown RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 RBP2P50120 134 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 RAD23AP54725 363 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 NUTF2P61970 127 aaKnown RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 MTM1Q13496 603 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 DGCR6Q14129 220 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 AGERQ15109 404 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 CDKN3Q16667 212 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 BTBD16Q32M84 506 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 TPRG1LQ5T0D9 272 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 KCTD11Q693B1 232 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 ESRP1Q6NXG1 681 aaKnown RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 MTDHQ86UE4 582 aaKnown RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 CARM1Q86X55 608 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 DHFR2Q86XF0 187 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 SPAG16Q8N0X2 631 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 STX19Q8N4C7 294 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 PACRGLQ8N7B6 248 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 SYT14Q8NB59 555 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 ADPRHL1Q8NDY3 354 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 S100PBPQ96BU1 408 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 EID2BQ96D98 161 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 C5orf34Q96MH7 638 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 WDR77Q9BQA1 342 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 SPXQ9BT56 116 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 RIOK2Q9BVS4 552 aaKnown RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 TRABDQ9H4I3 376 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 SLC35D1Q9NTN3 355 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 NINJ2Q9NZG7 142 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 PURGQ9UJV8 347 aaKnown RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 ELF5Q9UKW6 265 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 ARL5AQ9Y689 179 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 SCN8AQ9UQD0 1980 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 A0A1W2PPQ1 181 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 OR2AT4A6NND4 320 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 ERI2A8K979 691 aaKnown RBP10.96□□□□□ -0.65
BRCA1-222ENST00000493919 STX7O15400 261 aaKnown RBP10.96□□□□□ -0.65
BRCA1-222ENST00000493919 SDC3O75056 442 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 AHSA1O95433 338 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 TSHRP16473 764 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 TPH1P17752 444 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 PAX6P26367 422 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 PPP2R1BP30154 601 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 SPINT3P49223 89 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 PFN3P60673 137 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 TRA2BP62995 288 aaKnown RBP10.96□□□□□ -0.65
BRCA1-222ENST00000493919 NFKB2Q00653 900 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 CLCQ05315 142 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 ILKQ13418 452 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 ZNF542PQ5EBM4 170 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 LCN1P1Q5VSP4 162 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 DESI1Q6ICB0 168 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 IL20RBQ6UXL0 311 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 RNF111Q6ZNA4 994 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 TECPR1Q7Z6L1 1165 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 PARGQ86W56 976 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 LYSMD2Q8IV50 215 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 KLHDC8BQ8IXV7 354 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 EIF4E3Q8N5X7 224 aaKnown RBP10.96□□□□□ -0.65
BRCA1-222ENST00000493919 C19orf18Q8NEA5 215 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 OR52N2Q8NGI0 321 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 FAM174AQ8TBP5 190 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 RSC1A1Q92681 617 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 HTRA1Q92743 480 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 LINGO1Q96FE5 620 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 UBXN10Q96LJ8 280 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 KCNA7Q96RP8 456 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 ELF4Q99607 663 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-222ENST00000493919 EPB41L4BQ9H329 900 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 TEX10Q9NXF1 929 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-222ENST00000493919 MKLN1Q9UL63 735 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms