RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 POLDIP3Q9BY77 421 aaKnown RBP11.06□□□□□ -0.64
HDAC4-210ENST00000493582 ZNF436Q9C0F3 470 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-210ENST00000493582 CCSER2Q9H7U1 834 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 DNAJC11Q9NVH1 559 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 ST3GAL5Q9UNP4 418 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 A0A0G2JLL6 359 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-210ENST00000493582 KRBOX1C9JBD0 128 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 KDELR3O43731 214 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 CLDN7O95471 211 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 NMBP08949 121 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 SLC6A12P48065 614 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 BLVRAP53004 296 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 PCBP3P57721 371 aaKnown RBP11.06□□□□□ -0.64
HDAC4-210ENST00000493582 PIN1Q13526 163 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-210ENST00000493582 GRIN2CQ14957 1233 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 MPEG1Q2M385 716 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 ZNF791Q3KP31 576 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-210ENST00000493582 HSD17B12Q53GQ0 312 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 IGSF11Q5DX21 431 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 TCTE1Q5JU00 501 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 SPRYD7Q5W111 196 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 CXorf57Q6NSI4 855 aaKnown RBP11.06□□□□□ -0.64
HDAC4-210ENST00000493582 TRIM40Q6P9F5 258 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 PRRT2Q7Z6L0 340 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-210ENST00000493582 SIAH3Q8IW03 269 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 OR4F15Q8NGB8 312 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 OR5M3Q8NGP4 307 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 WDR48Q8TAF3 677 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 FBXO32Q969P5 355 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 SLC38A2Q96QD8 506 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 SARGQ9BW04 601 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 HPF1Q9NWY4 346 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 POMT2Q9UKY4 750 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 LIPT1Q9Y234 373 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 TMEM88BA6NKF7 163 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 RNASET2O00584 256 aaKnown RBP11.06□□□□□ -0.64
HDAC4-210ENST00000493582 CBX7O95931 251 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 H2AFB2P0C5Z0 115 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 MMP12P39900 470 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 MTNR1AP48039 350 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 ARHGDIBP52566 201 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 GPR85P60893 370 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 TAF10Q12962 218 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 MBTPS1Q14703 1052 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 C6orf132Q5T0Z8 1188 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 OVCH2Q7RTZ1 564 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 DGLUCYQ7Z3D6 616 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 TOMM5Q8N4H5 51 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 WDR20Q8TBZ3 569 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 SMG7Q92540 1137 aaKnown RBP11.06□□□□□ -0.64
HDAC4-210ENST00000493582 ATOH1Q92858 354 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-210ENST00000493582 ZFP3Q96NJ6 502 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 GPA33Q99795 319 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 TMEM38AQ9H6F2 299 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 FAM8A1Q9UBU6 413 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 MYO16Q9Y6X6 1858 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 A8MXK9 166 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 E7EQ34 232 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 PDCD5O14737 125 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 GATBO75879 557 aaKnown RBP11.05□□□□□ -0.64
HDAC4-210ENST00000493582 MT-ND4P03905 459 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 H1F0P07305 194 aaKnown RBP11.05□□□□□ -0.64
HDAC4-210ENST00000493582 ANKRD34CP0C6C1 535 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 ACP2P11117 423 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 DRD2P14416 443 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 CXCL2P19875 107 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 GKP32189 559 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 DGKGP49619 791 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 CRHR2Q13324 411 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 C16orf59Q7L2K0 433 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 ATAD1Q8NBU5 361 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 GPR32P1Q8NGA4 272 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 OR4D11Q8NGI4 311 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 ELMOD3Q96FG2 381 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 C12orf57Q99622 126 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 DPH7Q9BTV6 452 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 SLC6A15Q9H2J7 730 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 TTYH1Q9H313 450 aaPredicted RBP11.05□□□□□ -0.64
HDAC4-210ENST00000493582 ZFYVE1Q9HBF4 777 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 SPATA6Q9NWH7 488 aaPredicted RBP11.05□□□□□ -0.64
HDAC4-210ENST00000493582 GLS2Q9UI32 602 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 PRELID3BQ9Y3B1 194 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 RNF215Q9Y6U7 377 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 ARPC4-TTLL3A0A0A6YYG9 625 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 SAP18O00422 153 aaKnown RBP11.05□□□□□ -0.64
HDAC4-210ENST00000493582 NME6O75414 186 aaPredicted RBP11.05□□□□□ -0.64
HDAC4-210ENST00000493582 EPHX1P07099 455 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 SGSHP51688 502 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 PFN3P60673 137 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 GPR17Q13304 367 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 ZNF630Q2M218 657 aaPredicted RBP11.05□□□□□ -0.64
HDAC4-210ENST00000493582 PRAMEF19Q5SWL8 479 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 IER5LQ5T953 404 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 MACC1Q6ZN28 852 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 LRRC28Q86X40 367 aaPredicted RBP11.05□□□□□ -0.64
HDAC4-210ENST00000493582 GPC2Q8N158 579 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 SLC16A10Q8TF71 515 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 ADAMTS14Q8WXS8 1223 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 ART5Q96L15 291 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 PARK7Q99497 189 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms