RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 FAM9CQ8IZT9 166 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 TWIST2Q8WVJ9 160 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 PKNOX2Q96KN3 472 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 BBS4Q96RK4 519 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 MIEF1Q9NQG6 463 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 SENP1Q9P0U3 644 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 TRAF6Q9Y4K3 522 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 UNC79Q9P2D8 2635 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 CACNA1CQ13936 2221 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 MAST4O15021 2626 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 ATP6AP2A0A1C7CYW4 349 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 MYO1GB0I1T2 1018 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 ADAM10O14672 748 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 TP53I11O14683 189 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 ATP6AP2O75787 350 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 JUNP05412 331 aaKnown RBP22.66■■□□□ 1.22
UPF3A-209ENST00000492270 TMED10P49755 219 aaKnown RBP22.66■■□□□ 1.22
UPF3A-209ENST00000492270 RPL38P63173 70 aaKnown RBP22.66■■□□□ 1.22
UPF3A-209ENST00000492270 CEP85LQ5SZL2 805 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 CES4AQ5XG92 561 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 ZNF787Q6DD87 383 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 MTFR2Q6P444 385 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 ARHGAP11AQ6P4F7 1023 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 RNF165Q6ZSG1 346 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 EXOC3L1Q86VI1 746 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 DDIASQ8IXT1 998 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 OR7G2Q8NG99 324 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 SPPL2AQ8TCT8 520 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 GFM2Q969S9 779 aaKnown RBP22.66■■□□□ 1.22
UPF3A-209ENST00000492270 LCORQ96JN0 433 aaPredicted RBP22.66■■□□□ 1.22
UPF3A-209ENST00000492270 JSRP1Q96MG2 331 aaPredicted RBP22.66■■□□□ 1.22
UPF3A-209ENST00000492270 DOHHQ9BU89 302 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 CENPHQ9H3R5 247 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 ZNF703Q9H7S9 590 aaPredicted RBP22.66■■□□□ 1.22
UPF3A-209ENST00000492270 RYDENQ9NUL5 291 aaKnown RBP22.66■■□□□ 1.22
UPF3A-209ENST00000492270 GIMAP2Q9UG22 337 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 NAV2Q8IVL1 2488 aa22.66■■□□□ 1.22
UPF3A-209ENST00000492270 CENPEQ02224 2701 aa22.65■■□□□ 1.22
UPF3A-209ENST00000492270 CAPN14A8MX76 684 aa22.65■■□□□ 1.22
UPF3A-209ENST00000492270 PIP5K1BO14986 540 aa22.65■■□□□ 1.22
UPF3A-209ENST00000492270 LSM1O15116 133 aaKnown RBP22.65■■□□□ 1.22
UPF3A-209ENST00000492270 CHEK2O96017 543 aa22.65■■□□□ 1.22
UPF3A-209ENST00000492270 IGHG3P01860 377 aa22.65■■□□□ 1.22
UPF3A-209ENST00000492270 FGF4P08620 206 aa22.65■■□□□ 1.22
UPF3A-209ENST00000492270 NEFHP12036 1026 aa22.65■■□□□ 1.22
UPF3A-209ENST00000492270 GALNTL6Q49A17 601 aa22.65■■□□□ 1.22
UPF3A-209ENST00000492270 RFTN2Q52LD8 501 aaPredicted RBP22.65■■□□□ 1.22
UPF3A-209ENST00000492270 IKBIPQ70UQ0 350 aa22.65■■□□□ 1.22
UPF3A-209ENST00000492270 CLYBLQ8N0X4 340 aa22.65■■□□□ 1.22
UPF3A-209ENST00000492270 OR6Y1Q8NGX8 325 aa22.65■■□□□ 1.22
UPF3A-209ENST00000492270 OMA1Q96E52 524 aa22.65■■□□□ 1.22
UPF3A-209ENST00000492270 METTL2AQ96IZ6 378 aaKnown RBP22.65■■□□□ 1.22
UPF3A-209ENST00000492270 FCRL1Q96LA6 429 aa22.65■■□□□ 1.22
UPF3A-209ENST00000492270 EML4Q9HC35 981 aaKnown RBP22.65■■□□□ 1.22
UPF3A-209ENST00000492270 ZFP64Q9NPA5 681 aa22.65■■□□□ 1.22
UPF3A-209ENST00000492270 TNFRSF10DQ9UBN6 386 aa22.65■■□□□ 1.22
UPF3A-209ENST00000492270 PRODH2Q9UF12 536 aa22.65■■□□□ 1.22
UPF3A-209ENST00000492270 BOKQ9UMX3 212 aaPredicted RBP22.65■■□□□ 1.22
UPF3A-209ENST00000492270 CELSR2Q9HCU4 2923 aa22.64■■□□□ 1.21
UPF3A-209ENST00000492270 NPIPA2E9PIF3 369 aa22.64■■□□□ 1.21
UPF3A-209ENST00000492270 NPIPA3F8WFD2 350 aa22.64■■□□□ 1.21
UPF3A-209ENST00000492270 CTIFO43310 598 aaKnown RBP22.64■■□□□ 1.21
UPF3A-209ENST00000492270 PPM1BO75688 479 aa22.64■■□□□ 1.21
UPF3A-209ENST00000492270 ABCB1P08183 1280 aaPredicted RBP22.64■■□□□ 1.21
UPF3A-209ENST00000492270 SDC1P18827 310 aa22.64■■□□□ 1.21
UPF3A-209ENST00000492270 MPIP34949 423 aa22.64■■□□□ 1.21
UPF3A-209ENST00000492270 NCBP2P52298 156 aaKnown RBP eCLIP22.64■■□□□ 1.214e-7■■■■□ 22.1
UPF3A-209ENST00000492270 PLCXD2Q0VAA5 305 aa22.64■■□□□ 1.21
UPF3A-209ENST00000492270 EMC4Q5J8M3 183 aa22.64■■□□□ 1.21
UPF3A-209ENST00000492270 ANKRD26P1Q6NSI1 321 aa22.64■■□□□ 1.21
UPF3A-209ENST00000492270 PAOXQ6QHF9 649 aa22.64■■□□□ 1.21
UPF3A-209ENST00000492270 TRILQ7L0X0 811 aa22.64■■□□□ 1.21
UPF3A-209ENST00000492270 ZNF808Q8N4W9 903 aaPredicted RBP22.64■■□□□ 1.21
UPF3A-209ENST00000492270 CLHC1Q8NHS4 586 aa22.64■■□□□ 1.21
UPF3A-209ENST00000492270 HSPBAP1Q96EW2 488 aa22.64■■□□□ 1.21
UPF3A-209ENST00000492270 RILPQ96NA2 401 aa22.64■■□□□ 1.21
UPF3A-209ENST00000492270 DMRTA2Q96SC8 542 aa22.64■■□□□ 1.21
UPF3A-209ENST00000492270 TAS2R7Q9NYW3 318 aa22.64■■□□□ 1.21
UPF3A-209ENST00000492270 WDR91A4D1P6 747 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 ANKRD33BA6NCL7 494 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 TRIM3O75382 744 aaPredicted RBP22.63■■□□□ 1.21
UPF3A-209ENST00000492270 DCTP40126 519 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 MC3RP41968 323 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 PPICP45877 212 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 SERPINB4P48594 390 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 CORO7P57737 925 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 CDSNQ15517 529 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 NPSR1Q6W5P4 371 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 RPTNQ6XPR3 784 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 HGDQ93099 445 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 ERP27Q96DN0 273 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 ZNF597Q96LX8 424 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 VSTM2LQ96N03 204 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 TSSK3Q96PN8 268 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 CCT7Q99832 543 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 GLIPR2Q9H4G4 154 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 FOLH1BQ9HBA9 442 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 BAIAP2L1Q9UHR4 511 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 ZDHHC2Q9UIJ5 367 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 GPR55Q9Y2T6 319 aaPredicted RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms