RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	GALNT9	Q9HCQ5	603 aa		17.4	■□□□□ 0.38
CDK5RAP2-218	ENST00000491334	LYAR	Q9NX58	379 aa	Known RBP	17.4	■□□□□ 0.38
CDK5RAP2-218	ENST00000491334	MRPS18C	Q9Y3D5	142 aa	Known RBP	17.4	■□□□□ 0.38
CDK5RAP2-218	ENST00000491334		A0A1W2PR48	441 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	EMC8	O43402	210 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	CGA	P01215	116 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	FAM157C	P0CG43	387 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	NR2F6	P10588	404 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	CD8B	P10966	210 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	SRD5A2	P31213	254 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PTGDS	P41222	190 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	RPS4X	P62701	263 aa	Known RBP	17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	SIRPA	P78324	504 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	E2F2	Q14209	437 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	MSS51	Q4VC12	460 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	C6orf163	Q5TEZ5	329 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	TRMT10B	Q6PF06	316 aa	Known RBP	17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	ZC3HC1	Q86WB0	502 aa	Known RBP	17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	ZNF610	Q8N9Z0	462 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	HGD	Q93099	445 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	ZBED6CL	Q96FA7	236 aa	Predicted RBP	17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	NXF5	Q9H1B4	397 aa	Known RBP	17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	CD274	Q9NZQ7	290 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	LAMP3	Q9UQV4	416 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	ASB4	Q9Y574	426 aa		17.39	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PLPP1	O14494	284 aa		17.38	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	EPOR	P19235	508 aa		17.38	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PIK3R1	P27986	724 aa		17.38	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	SLC12A2	P55011	1212 aa		17.38	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	OCRL	Q01968	901 aa		17.38	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	CYP20A1	Q6UW02	462 aa		17.38	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PLCZ1	Q86YW0	608 aa		17.38	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	CFAP36	Q96G28	342 aa		17.38	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	CD244	Q9BZW8	370 aa		17.38	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	POPDC3	Q9HBV1	291 aa		17.38	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	CFL2	Q9Y281	166 aa		17.38	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	ABCB7	O75027	752 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	AIFM1	O95831	613 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PLAU	P00749	431 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	CT62	P0C5K7	136 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	FAM58BP	P0C7Q3	252 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	EPB42	P16452	691 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	GPX3	P22352	226 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PTX3	P26022	381 aa	Predicted RBP	17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PIK3CB	P42338	1070 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	EEFSEC	P57772	596 aa	Known RBP	17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	DDX39B	Q13838	428 aa	Known RBP	17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	DESI1	Q6ICB0	168 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	MRM1	Q6IN84	353 aa	Known RBP	17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	HUS1B	Q8NHY5	278 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	GRK7	Q8WTQ7	553 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	OMA1	Q96E52	524 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	AMBRA1	Q9C0C7	1298 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	DDX31	Q9H8H2	851 aa	Known RBP	17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PLAC1	Q9HBJ0	212 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	HEY2	Q9UBP5	337 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	CDC42EP3	Q9UKI2	254 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PROCR	Q9UNN8	238 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PSAT1	Q9Y617	370 aa		17.37	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	17.37	■□□□□ 0.37	8e-13	■■■□□ 15.9
CDK5RAP2-218	ENST00000491334	PRAMEF25	A6NGN4	478 aa		17.36	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	ACOX3	O15254	700 aa		17.36	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	S100B	P04271	92 aa	Predicted RBP	17.36	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	THBD	P07204	575 aa		17.36	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PEPD	P12955	493 aa		17.36	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	CYP1B1	Q16678	543 aa		17.36	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	17.36	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	OR52E8	Q6IFG1	317 aa		17.36	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	LRRC70	Q7Z2Q7	622 aa		17.36	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	SPATA6L	Q8N4H0	392 aa		17.36	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	OR4K14	Q8NGD5	310 aa		17.36	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	AKAP1	Q92667	903 aa	Known RBP eCLIP	17.36	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	TMCO6	Q96DC7	493 aa		17.36	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PLPPR2	Q96GM1	343 aa		17.36	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	DKKL1	Q9UK85	242 aa		17.36	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334		A0A0A6YYD5	115 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	OVOL3	O00110	214 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PGRMC2	O15173	223 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	TMPRSS11D	O60235	418 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	TNFRSF21	O75509	655 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	EED	O75530	441 aa	Known RBP	17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	NT5E	P21589	574 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	CNTF	P26441	200 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	ELK3	P41970	407 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	XK	P51811	444 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	HMGCS1	Q01581	520 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PLCXD2	Q0VAA5	305 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	ILF2	Q12905	390 aa	Known RBP	17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	UBQLNL	Q8IYU4	475 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PDIK1L	Q8N165	341 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	RNF175	Q8N4F7	328 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	PDPR	Q8NCN5	879 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	TRIM58	Q8NG06	486 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	FIG4	Q92562	907 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	GTPBP3	Q969Y2	492 aa	Known RBP	17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	LCOR	Q96JN0	433 aa	Predicted RBP	17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	MTERF1	Q99551	399 aa	Known RBP	17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	TMEM204	Q9BSN7	226 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	FBXL2	Q9UKC9	423 aa		17.35	■□□□□ 0.37
CDK5RAP2-218	ENST00000491334	ZIC3	O60481	467 aa		17.34	■□□□□ 0.37

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms