RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 ELAVL1Q15717 326 aaKnown RBP9.35□□□□□ -0.91
USP11-211ENST00000489111 GPAT3Q53EU6 434 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 CYBRD1Q53TN4 286 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 RPS26P11Q5JNZ5 115 aaPredicted RBP9.35□□□□□ -0.91
USP11-211ENST00000489111 MLIPQ5VWP3 458 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 ZCCHC12Q6PEW1 402 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 DGAT2L6Q6ZPD8 337 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 SHISA6Q6ZSJ9 500 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 FKBP9P1Q75LS8 142 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 CCDC80Q76M96 950 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 EIF3MQ7L2H7 374 aaKnown RBP9.35□□□□□ -0.91
USP11-211ENST00000489111 OVCH1Q7RTY7 1134 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 TMEM151BQ8IW70 566 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 FAM86B1Q8N7N1 296 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 COX18Q8N8Q8 333 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 OR14A16Q8NHC5 309 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 BBS10Q8TAM1 723 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 METTL21AQ8WXB1 218 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 MR1Q95460 341 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 CTHRC1Q96CG8 243 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 GIMAP5Q96F15 307 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 PYURFQ96I23 114 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 TPD52L3Q96J77 140 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 HSH2DQ96JZ2 352 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 ART5Q96L15 291 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 TRNT1Q96Q11 434 aaKnown RBP9.35□□□□□ -0.91
USP11-211ENST00000489111 PKP2Q99959 881 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 CHID1Q9BWS9 393 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 TRIM45Q9H8W5 580 aaPredicted RBP9.35□□□□□ -0.91
USP11-211ENST00000489111 SLC22A11Q9NSA0 550 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 BAG5Q9UL15 447 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 ERVK-19Q9WJR5 959 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 CLDN16Q9Y5I7 305 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 CLCA3PQ9Y6N3 262 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 PI4KAP42356 2102 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 TCRBV16S1A1N1A0A5B0 115 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 A8MUA0 341 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 IDSB3KWA1 339 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 SERPINB7O75635 380 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 SOX30O94993 753 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 PGM3O95394 542 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 CBX7O95931 251 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 ONECUT2O95948 504 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 AK1P00568 194 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 LDLRP01130 860 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 ALBP02768 609 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 MT-ND1P03886 318 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 OPN1SWP03999 348 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 CYC1P08574 325 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 ACP2P11117 423 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 ZNF28P17035 718 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 ITIH1P19827 911 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 SSTR4P31391 388 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 VHLP40337 213 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 PTDSS1P48651 473 aaKnown RBP9.34□□□□□ -0.91
USP11-211ENST00000489111 MAN2A2P49641 1150 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 LIMK1P53667 647 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 PCBP3P57721 371 aaKnown RBP9.34□□□□□ -0.91
USP11-211ENST00000489111 MYBPC3Q14896 1274 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 SYPL1Q16563 259 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 DUSP5Q16690 384 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 CRB2Q5IJ48 1285 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 PRAMEF8Q5VWM4 474 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 PRAMEF7Q5VXH5 474 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 ZNF385CQ66K41 422 aaPredicted RBP9.34□□□□□ -0.91
USP11-211ENST00000489111 CBLL1Q75N03 491 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 ERMP1Q7Z2K6 904 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 WDR53Q7Z5U6 358 aaPredicted RBP9.34□□□□□ -0.91
USP11-211ENST00000489111 ARMC8Q8IUR7 673 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 ANKFN1Q8N957 763 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 SLC16A11Q8NCK7 471 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 PAPD5Q8NDF8 572 aaKnown RBP9.34□□□□□ -0.91
USP11-211ENST00000489111 SIMC1Q8NDZ2 872 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 CATSPER1Q8NEC5 780 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 OR7G1Q8NGA0 311 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 GPR151Q8TDV0 419 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 LRTOMTQ8WZ04 291 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 CDS1Q92903 461 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 DAZLQ92904 295 aaKnown RBP9.34□□□□□ -0.91
USP11-211ENST00000489111 PMEPA1Q969W9 287 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 TAMM41Q96BW9 452 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 FBXL20Q96IG2 436 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 LRFN5Q96NI6 719 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 COL21A1Q96P44 957 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 TAAR9Q96RI9 348 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 STACQ99469 402 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 TREX2Q9BQ50 279 aaPredicted RBP9.34□□□□□ -0.91
USP11-211ENST00000489111 CRB3Q9BUF7 120 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 SPATA5L1Q9BVQ7 753 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 DDA1Q9BW61 102 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 SLC26A1Q9H2B4 701 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 VCXQ9H320 206 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 SOX17Q9H6I2 414 aaPredicted RBP9.34□□□□□ -0.91
USP11-211ENST00000489111 WDR54Q9H977 334 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 FOLH1BQ9HBA9 442 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 DUSP22Q9NRW4 184 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 TOR4AQ9NXH8 423 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 GIN1Q9NXP7 522 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 COPS7AQ9UBW8 275 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 PRODH2Q9UF12 536 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms