RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 RDH11Q8TC12 318 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 VN1R17PQ8TDU5 208 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 PNPLA2Q96AD5 504 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 PRAM1Q96QH2 718 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 SLITRK2Q9H156 845 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 DCTPP1Q9H773 170 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 PNPLA3Q9NST1 481 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 ACOXLQ9NUZ1 547 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 VPS54Q9P1Q0 977 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 ERVK-18Q9QC07 812 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 HOOK1Q9UJC3 728 aaKnown RBP2.99□□□□□ -1.93
SSR1-209ENST00000488834 DIMT1Q9UNQ2 313 aaKnown RBP2.99□□□□□ -1.93
SSR1-209ENST00000488834 TDRKHQ9Y2W6 561 aaKnown RBP2.99□□□□□ -1.93
SSR1-209ENST00000488834 ABCA7Q8IZY2 2146 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 ZNF318Q5VUA4 2279 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 AGRNO00468 2067 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 RAD50Q92878 1312 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 KIF16BQ96L93 1317 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 ATAD2BQ9ULI0 1458 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 FER1L5A0AVI2 2057 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 FAM168BA1KXE4 195 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 RGSL1A5PLK6 1076 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 EFCAB7A8K855 629 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 TSPAN2O60636 221 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 APBB3O95704 486 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 LY6G6DO95868 133 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 TXNDC12O95881 172 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 OLFM2O95897 454 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 FCER2P06734 321 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 HEXBP07686 556 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 SNRPCP09234 159 aaKnown RBP2.98□□□□□ -1.93
SSR1-209ENST00000488834 NEFHP12036 1026 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 RPS2P15880 293 aaKnown RBP2.98□□□□□ -1.93
SSR1-209ENST00000488834 PRPHP41219 470 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 HERV-K104P63124 156 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 TSTA3Q13630 321 aaPredicted RBP2.98□□□□□ -1.93
SSR1-209ENST00000488834 PDE7AQ13946 482 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 GK2Q14410 553 aaPredicted RBP2.98□□□□□ -1.93
SSR1-209ENST00000488834 GSG1Q2KHT4 349 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 TCHHL1Q5QJ38 904 aaPredicted RBP2.98□□□□□ -1.93
SSR1-209ENST00000488834 KRTAP5-4Q6L8H1 288 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 CDC42EP5Q6NZY7 148 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 CCBE1Q6UXH8 406 aaPredicted RBP2.98□□□□□ -1.93
SSR1-209ENST00000488834 ZNF410Q86VK4 478 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 SFRP1Q8N474 314 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 MNS1Q8NEH6 495 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 NEK11Q8NG66 645 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 RNASE8Q8TDE3 154 aaKnown RBP2.98□□□□□ -1.93
SSR1-209ENST00000488834 SYAP1Q96A49 352 aaPredicted RBP2.98□□□□□ -1.93
SSR1-209ENST00000488834 ZNF560Q96MR9 790 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 SPXQ9BT56 116 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 TEX13AQ9BXU3 409 aaPredicted RBP2.98□□□□□ -1.93
SSR1-209ENST00000488834 KRT23Q9C075 422 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 DDX47Q9H0S4 455 aaKnown RBP2.98□□□□□ -1.93
SSR1-209ENST00000488834 ADGRL4Q9HBW9 690 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 FANCFQ9NPI8 374 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 HMG20BQ9P0W2 317 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 ACTR3BQ9P1U1 418 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 CELA1Q9UNI1 258 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 KIF3AQ9Y496 699 aa2.98□□□□□ -1.93
SSR1-209ENST00000488834 KIF7Q2M1P5 1343 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 A0A1W2PQ72 361 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 CHEK1O14757 476 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 CFLARO15519 480 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 SMPD2O60906 423 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 ZNF853P0CG23 659 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 PGAM2P15259 253 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 UCP1P25874 307 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 SLC26A5P58743 744 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 STARD6P59095 220 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 LYZP61626 148 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 IGLV3-21P80748 117 aaPredicted RBP2.97□□□□□ -1.93
SSR1-209ENST00000488834 MRPL28Q13084 256 aaKnown RBP2.97□□□□□ -1.93
SSR1-209ENST00000488834 KLF5Q13887 457 aaPredicted RBP2.97□□□□□ -1.93
SSR1-209ENST00000488834 CARTPTQ16568 116 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 MICAQ29983 383 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 GPAT3Q53EU6 434 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 FAM219BQ5XKK7 198 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 IRGCQ6NXR0 463 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 OLFM4Q6UX06 510 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 MOB2Q70IA6 237 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 PRR22Q8IZ63 422 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 FBXO30Q8TB52 745 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 BIRC7Q96CA5 298 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 NTNG2Q96CW9 530 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 MRPL53Q96EL3 112 aaKnown RBP2.97□□□□□ -1.93
SSR1-209ENST00000488834 VPS39Q96JC1 886 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 ZIM3Q96PE6 472 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 SIGLEC12Q96PQ1 595 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 RANBP9Q96S59 729 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 PAIP2Q9BPZ3 127 aaKnown RBP2.97□□□□□ -1.93
SSR1-209ENST00000488834 C19orf43Q9BQ61 176 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 TTYH2Q9BSA4 534 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 TRPV6Q9H1D0 765 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 MED4Q9NPJ6 270 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 ZNF275Q9NSD4 429 aaPredicted RBP2.97□□□□□ -1.93
SSR1-209ENST00000488834 NDUFA13Q9P0J0 144 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 CGNQ9P2M7 1197 aaKnown RBP2.97□□□□□ -1.93
SSR1-209ENST00000488834 TUBGCP4Q9UGJ1 667 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms