RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 MAGEB3O15480 346 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 CFIP05156 583 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 NR2F1P10589 423 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 GPLD1P80108 840 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 FAM53BQ14153 422 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 SYT16Q17RD7 645 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 ZIK1Q3SY52 487 aaPredicted RBP18.94■□□□□ 0.62
NECAB3-213ENST00000488489 ZNF628Q5EBL2 1059 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 PEAR1Q5VY43 1037 aaPredicted RBP18.94■□□□□ 0.62
NECAB3-213ENST00000488489 SHQ1Q6PI26 577 aaKnown RBP18.94■□□□□ 0.62
NECAB3-213ENST00000488489 Q6ZNX1 250 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 OR2L13Q8N349 312 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 CCDC74AQ96AQ1 378 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 SDCCAG3Q96C92 435 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 ZC3H10Q96K80 434 aaKnown RBP18.94■□□□□ 0.62
NECAB3-213ENST00000488489 LY6G6EA0A0G2JKS1 128 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 ALBP02768 609 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 ATP1B1P05026 303 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 CHRM4P08173 479 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 CD247P20963 164 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 PUM1Q14671 1186 aaKnown RBP eCLIP18.94■□□□□ 0.62
NECAB3-213ENST00000488489 NDUFA9Q16795 377 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 ARMC8Q8IUR7 673 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 METTL27Q8N6F8 245 aaPredicted RBP18.94■□□□□ 0.62
NECAB3-213ENST00000488489 GPR32P1Q8NGA4 272 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 OR2I1PQ8NGU4 316 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 FAM210AQ96ND0 272 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 OR7D2Q96RA2 312 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 NUDT22Q9BRQ3 303 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 FAIMQ9NVQ4 179 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 IFT80Q9P2H3 777 aaPredicted RBP18.94■□□□□ 0.62
NECAB3-213ENST00000488489 U3KQA8 63 aa18.94■□□□□ 0.62
NECAB3-213ENST00000488489 FITM1A5D6W6 292 aa18.93■□□□□ 0.62
NECAB3-213ENST00000488489 TMX2-CTNND1H3BSU7 103 aa18.93■□□□□ 0.62
NECAB3-213ENST00000488489 NSA2O95478 260 aaKnown RBP18.93■□□□□ 0.62
NECAB3-213ENST00000488489 MAGEA8P43361 318 aa18.93■□□□□ 0.62
NECAB3-213ENST00000488489 YAP1P46937 504 aaKnown RBP18.93■□□□□ 0.62
NECAB3-213ENST00000488489 HSD11B2P80365 405 aa18.93■□□□□ 0.62
NECAB3-213ENST00000488489 TCTE1Q5JU00 501 aa18.93■□□□□ 0.62
NECAB3-213ENST00000488489 LGI4Q8N135 537 aa18.93■□□□□ 0.62
NECAB3-213ENST00000488489 DTWD2Q8NBA8 298 aa18.93■□□□□ 0.62
NECAB3-213ENST00000488489 APOBEC4Q8WW27 367 aaKnown RBP18.93■□□□□ 0.62
NECAB3-213ENST00000488489 PEX11GQ96HA9 241 aa18.93■□□□□ 0.62
NECAB3-213ENST00000488489 GAREM1Q9H706 876 aa18.93■□□□□ 0.62
NECAB3-213ENST00000488489 USE1Q9NZ43 259 aa18.93■□□□□ 0.62
NECAB3-213ENST00000488489 MN1Q10571 1320 aaPredicted RBP18.93■□□□□ 0.62
NECAB3-213ENST00000488489 A8MU76 341 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 SIGLEC6O43699 453 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 HPRP00739 348 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 DNAJA1P31689 397 aaKnown RBP18.92■□□□□ 0.62
NECAB3-213ENST00000488489 ERV3-1Q14264 604 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 FHL5Q5TD97 284 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 GARNL3Q5VVW2 1013 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 MFSD12Q6NUT3 480 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 ZNF554Q86TJ5 538 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 HIPK1Q86Z02 1210 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 SLC16A11Q8NCK7 471 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 OR4C6Q8NH72 309 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 COL21A1Q96P44 957 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 RBM4BQ9BQ04 359 aaKnown RBP18.92■□□□□ 0.62
NECAB3-213ENST00000488489 DUSP23Q9BVJ7 150 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 RBM4Q9BWF3 364 aaKnown RBP18.92■□□□□ 0.62
NECAB3-213ENST00000488489 AMBRA1Q9C0C7 1298 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 SEMA5BQ9P283 1151 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 TMEFF2Q9UIK5 374 aaPredicted RBP18.92■□□□□ 0.62
NECAB3-213ENST00000488489 SAMHD1Q9Y3Z3 626 aaKnown RBP18.92■□□□□ 0.62
NECAB3-213ENST00000488489 ZNF451Q9Y4E5 1061 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 A0A1W2PPW3 197 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 TMEM247A6NEH6 219 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 OR2W5A6NFC9 320 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 CDC123O75794 336 aaPredicted RBP18.92■□□□□ 0.62
NECAB3-213ENST00000488489 THRBP10828 461 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 FUT4P22083 530 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 RRM2P31350 389 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 MGAT2Q10469 447 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 INAVAQ3KP66 663 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 GUSBP11Q6P575 273 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 ZNF773Q6PK81 442 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 DGAT2L6Q6ZPD8 337 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 TMPRSS9Q7Z410 1059 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 TBC1D15Q8TC07 691 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 GEMIN6Q8WXD5 167 aaKnown RBP18.92■□□□□ 0.62
NECAB3-213ENST00000488489 BORCS5Q969J3 196 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 ZNF300Q96RE9 604 aaPredicted RBP18.92■□□□□ 0.62
NECAB3-213ENST00000488489 ACTRT3Q9BYD9 372 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 THSD1Q9NS62 852 aa18.92■□□□□ 0.62
NECAB3-213ENST00000488489 CHCHD3Q9NX63 227 aaKnown RBP18.92■□□□□ 0.62
NECAB3-213ENST00000488489 GPC6Q9Y625 555 aaPredicted RBP18.92■□□□□ 0.62
NECAB3-213ENST00000488489 TGFBR3LH3BV60 316 aa18.91■□□□□ 0.62
NECAB3-213ENST00000488489 J3KTA2 159 aa18.91■□□□□ 0.62
NECAB3-213ENST00000488489 DPM1O60762 260 aa18.91■□□□□ 0.62
NECAB3-213ENST00000488489 CT62P0C5K7 136 aa18.91■□□□□ 0.62
NECAB3-213ENST00000488489 JUNBP17275 347 aaPredicted RBP18.91■□□□□ 0.62
NECAB3-213ENST00000488489 PPP2R1BP30154 601 aa18.91■□□□□ 0.62
NECAB3-213ENST00000488489 CRISP3P54108 245 aa18.91■□□□□ 0.62
NECAB3-213ENST00000488489 NEDD8Q15843 81 aa18.91■□□□□ 0.62
NECAB3-213ENST00000488489 PRICKLE4Q2TBC4 344 aa18.91■□□□□ 0.62
NECAB3-213ENST00000488489 WDR74Q6RFH5 385 aaPredicted RBP18.91■□□□□ 0.62
NECAB3-213ENST00000488489 HMGN2P46Q86SG4 172 aa18.91■□□□□ 0.62
NECAB3-213ENST00000488489 CYP4Z1Q86W10 505 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms