RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 DCDC5Q6ZRR9 648 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 ZNF551Q7Z340 670 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-210ENST00000487017 CHDHQ8NE62 594 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-210ENST00000487017 OR4C15Q8NGM1 316 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 OR8K5Q8NH50 307 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 TMEM234Q8WY98 164 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 MTG2Q9H4K7 406 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 SLC2A4RGQ9NR83 387 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 NLKQ9UBE8 527 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 A0A1W2PP55 124 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 MEN1O00255 615 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 TOXO94900 526 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 SLC16A8O95907 504 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 SERPINA11Q86U17 422 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 UBQLNLQ8IYU4 475 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 JPH3Q8WXH2 748 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-210ENST00000487017 WDR92Q96MX6 357 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 ZNF559Q9BR84 538 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 PCDHB16Q9NRJ7 776 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 TAS2R3Q9NYW6 316 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 A0A1W2PQL4 384 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-210ENST00000487017 OR6C74A6NCV1 312 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 CFL1P23528 166 aaKnown RBP15.65■□□□□ 0.1
COL7A1-210ENST00000487017 DPP6P42658 865 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 NKX2-5P52952 324 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-210ENST00000487017 CBARPQ8N350 705 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-210ENST00000487017 MDGA1Q8NFP4 955 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 CHFRQ96EP1 664 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 WDR77Q9BQA1 342 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-210ENST00000487017 IL26Q9NPH9 171 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 CLDND1Q9NY35 253 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 CLEC3AO75596 197 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 CDC123O75794 336 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 UCHL1P09936 223 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 H2BFMP0C1H6 154 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 PRDX3P30048 256 aaKnown RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 RBMXP38159 391 aaKnown RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 SUOXP51687 545 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 HERV-K104P61576 105 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 GK3PQ14409 553 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 KIAA0319Q5VV43 1072 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 GDPGP1Q6ZNW5 385 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 IQCF1Q8N6M8 205 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 TRIB2Q92519 343 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 DPCDQ9BVM2 203 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 ZNF717Q9BY31 904 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 LDAHQ9H6V9 325 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 PTGES2Q9H7Z7 377 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 ZBTB20Q9HC78 741 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 H7C2Y5 167 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 APOFQ13790 326 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 METTL27Q8N6F8 245 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 WDR20Q8TBZ3 569 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 RDH14Q9HBH5 336 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 C19orf25Q9UFG5 118 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 PADI2Q9Y2J8 665 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 GPR52Q9Y2T5 361 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 TEX13CA0A0J9YWL9 993 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 PRKCAP17252 672 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 RAB3BP20337 219 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 PLEKHN1Q494U1 663 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 RPS26P11Q5JNZ5 115 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 GARNL3Q5VVW2 1013 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 HYLS1Q96M11 299 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 C3orf30Q96M34 536 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 GPN2Q9H9Y4 310 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 PELI2Q9HAT8 420 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 COPZ2Q9P299 210 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 RNASET2O00584 256 aaKnown RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 CREBL2O60519 120 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 RGS19P49795 217 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 SNTA1Q13424 505 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 USF2Q15853 346 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 ZNF791Q3KP31 576 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 PLBD1Q6P4A8 553 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 PIWIL3Q7Z3Z3 882 aaKnown RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 ARHGAP12Q8IWW6 846 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 ZNF283Q8N7M2 679 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 SORCS1Q8WY21 1168 aa15.64■□□□□ 0.09
COL7A1-210ENST00000487017 SRA1Q9HD15 236 aaKnown RBP15.64■□□□□ 0.09
COL7A1-210ENST00000487017 EFR3AQ14156 821 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 HAGHLQ6PII5 290 aaPredicted RBP15.63■□□□□ 0.09
COL7A1-210ENST00000487017 KLHDC7BQ96G42 594 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 CACNG6Q9BXT2 260 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 ZNF226Q9NYT6 803 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 ITGAMP11215 1152 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 SDC1P18827 310 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 HTR2BP41595 481 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 NRMQ8IXM6 262 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 VWA5B2Q8N398 1253 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 DNAJA3Q96EY1 480 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 SLC41A3Q96GZ6 507 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 PTCHD1Q96NR3 888 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 ZNF300Q96RE9 604 aaPredicted RBP15.63■□□□□ 0.09
COL7A1-210ENST00000487017 NANSQ9NR45 359 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 ASB6Q9NWX5 421 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 EPHA6Q9UF33 1036 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 IL33O95760 270 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 CA5AP35218 305 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 ZNF140P52738 457 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms