RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 TP63Q9H3D4 680 aaPredicted RBP16.21■□□□□ 0.19
COL6A1-204ENST00000486023 METTL7AQ9H8H3 244 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 ROPN1Q9HAT0 212 aaPredicted RBP16.21■□□□□ 0.19
COL6A1-204ENST00000486023 PLSCR2Q9NRY7 297 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 B4GALT7Q9UBV7 327 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 PRODH2Q9UF12 536 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 ZNF639Q9UID6 485 aa16.21■□□□□ 0.19
COL6A1-204ENST00000486023 TEX15Q9BXT5 2789 aa16.21■□□□□ 0.18
COL6A1-204ENST00000486023 SERTM1A2A2V5 107 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 SLC28A1O00337 649 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 RGS14O43566 566 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 ZNF500O60304 480 aaPredicted RBP16.2■□□□□ 0.18
COL6A1-204ENST00000486023 CLDN14O95500 239 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 CHEK2O96017 543 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 CHRNGP07510 517 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 CREB1P16220 341 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 DDCP20711 480 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 NCBP2P52298 156 aaKnown RBP eCLIP16.2■□□□□ 0.18
COL6A1-204ENST00000486023 RPP38P78345 283 aaKnown RBP16.2■□□□□ 0.18
COL6A1-204ENST00000486023 PRSS53Q2L4Q9 553 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 ZNF628Q5EBL2 1059 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 EMC4Q5J8M3 183 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 TMEM211Q6ICI0 200 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 WDR93Q6P2C0 686 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 GALNT18Q6P9A2 607 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 ZCCHC23Q6ZST2 131 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 PACS2Q86VP3 889 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 DDIASQ8IXT1 998 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 SAMD14Q8IZD0 417 aaPredicted RBP16.2■□□□□ 0.18
COL6A1-204ENST00000486023 OMA1Q96E52 524 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 ZNF597Q96LX8 424 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 DMRTA2Q96SC8 542 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 SLC6A15Q9H2J7 730 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 CENPHQ9H3R5 247 aa16.2■□□□□ 0.18
COL6A1-204ENST00000486023 KLF2Q9Y5W3 355 aaPredicted RBP16.2■□□□□ 0.18
COL6A1-204ENST00000486023 LRRC3CA6NJW4 275 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 TMEM233B4DJY2 109 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 HNRNPRO43390 633 aaKnown RBP16.19■□□□□ 0.18
COL6A1-204ENST00000486023 REM1O75628 298 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 PPM1BO75688 479 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 RSL1D1O76021 490 aaKnown RBP16.19■□□□□ 0.18
COL6A1-204ENST00000486023 ABCB1P08183 1280 aaPredicted RBP16.19■□□□□ 0.18
COL6A1-204ENST00000486023 SOX18P35713 384 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 EMDP50402 254 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 ZNF630Q2M218 657 aaPredicted RBP16.19■□□□□ 0.18
COL6A1-204ENST00000486023 HYAL4Q2M3T9 481 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 KRT71Q3SY84 523 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 GALNTL6Q49A17 601 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 TBCELQ5QJ74 424 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 SH2D4BQ5SQS7 431 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 WLSQ5T9L3 541 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 CCDC71Q8IV32 467 aaPredicted RBP16.19■□□□□ 0.18
COL6A1-204ENST00000486023 FAM9CQ8IZT9 166 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 SLC34A3Q8N130 599 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 MARVELD2Q8N4S9 558 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 CAVIN3Q969G5 261 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 CTHRC1Q96CG8 243 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 EGLN2Q96KS0 407 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 ZNF703Q9H7S9 590 aaPredicted RBP16.19■□□□□ 0.18
COL6A1-204ENST00000486023 LRTM1Q9HBL6 345 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 CHST11Q9NPF2 352 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 KLRF1Q9NZS2 232 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 LGALS13Q9UHV8 139 aa16.19■□□□□ 0.18
COL6A1-204ENST00000486023 C15orf38-AP3S2A0A0A6YYH1 394 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 WDR91A4D1P6 747 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 C19orf84I3L1E1 186 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 AQP7O14520 342 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 BCKDKO14874 412 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 AKAP10O43572 662 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 TRIM3O75382 744 aaPredicted RBP16.18■□□□□ 0.18
COL6A1-204ENST00000486023 SNX4O95219 450 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 IGHG3P01860 377 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 COX6B1P14854 86 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 TACR1P25103 407 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 KRT20P35900 424 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 CASP3P42574 277 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 PPICP45877 212 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 CORO7P57737 925 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 DCAF7P61962 342 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 ARL13AQ5H913 290 aaPredicted RBP16.18■□□□□ 0.18
COL6A1-204ENST00000486023 FAM71E1Q6IPT2 247 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 ANKRD26P1Q6NSI1 321 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 TMEM107Q6UX40 140 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 NUP54Q7Z3B4 507 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 OR7G2Q8NG99 324 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 CLHC1Q8NHS4 586 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 PHF10Q8WUB8 498 aaKnown RBP16.18■□□□□ 0.18
COL6A1-204ENST00000486023 RND1Q92730 232 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 TMBIM1Q969X1 311 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 SARAFQ96BY9 339 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 HSPBAP1Q96EW2 488 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 C11orf24Q96F05 449 aaPredicted RBP16.18■□□□□ 0.18
COL6A1-204ENST00000486023 NODALQ96S42 347 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 ANGPTL4Q9BY76 406 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 C1orf109Q9NX04 203 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 SPRR3Q9UBC9 169 aa16.18■□□□□ 0.18
COL6A1-204ENST00000486023 A0A1B0GVC2 190 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 ANKRD33BA6NCL7 494 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 OR14I1A6ND48 311 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 FIGNL2A6NMB9 653 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms