RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 ENDOVQ8N8Q3 282 aaKnown RBP13.54□□□□□ -0.24
LRIF1-202ENST00000485275 NFKBIDQ8NI38 313 aa13.54□□□□□ -0.24
LRIF1-202ENST00000485275 CT55Q8WUE5 264 aa13.54□□□□□ -0.24
LRIF1-202ENST00000485275 FIG4Q92562 907 aa13.54□□□□□ -0.24
LRIF1-202ENST00000485275 C8orf44Q96CB5 159 aa13.54□□□□□ -0.24
LRIF1-202ENST00000485275 OR7D2Q96RA2 312 aa13.54□□□□□ -0.24
LRIF1-202ENST00000485275 CRB3Q9BUF7 120 aa13.54□□□□□ -0.24
LRIF1-202ENST00000485275 RSPO3Q9BXY4 272 aaPredicted RBP13.54□□□□□ -0.24
LRIF1-202ENST00000485275 TMEM38AQ9H6F2 299 aa13.54□□□□□ -0.24
LRIF1-202ENST00000485275 FAF1Q9UNN5 650 aaPredicted RBP13.54□□□□□ -0.24
LRIF1-202ENST00000485275 AP3M1Q9Y2T2 418 aa13.54□□□□□ -0.24
LRIF1-202ENST00000485275 ZIC2O95409 532 aaPredicted RBP13.53□□□□□ -0.24
LRIF1-202ENST00000485275 TFPTP0C1Z6 253 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 AQP1P29972 269 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 PCGF2P35227 344 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 DUSP5Q16690 384 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 TMEM205Q6UW68 189 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 ZSCAN1Q8NBB4 408 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 SLC2A12Q8TD20 617 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 ZNF721Q8TF20 911 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 SLC38A5Q8WUX1 472 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 JADE3Q92613 823 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 HOXB13Q92826 284 aaPredicted RBP13.53□□□□□ -0.24
LRIF1-202ENST00000485275 SLC46A1Q96NT5 459 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 PELOQ9BRX2 385 aaKnown RBP13.53□□□□□ -0.24
LRIF1-202ENST00000485275 ACTRT3Q9BYD9 372 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 RUBCNLQ9H714 662 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 POLR1BQ9H9Y6 1135 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 ASCL3Q9NQ33 180 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 AKAP13Q12802 2813 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 CDRT15L2A8MXV6 281 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 TMEM229AB2RXF0 380 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 C9J4A7 227 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 TERTO14746 1132 aaKnown RBP13.53□□□□□ -0.24
LRIF1-202ENST00000485275 PRKNO60260 465 aaPredicted RBP13.53□□□□□ -0.24
LRIF1-202ENST00000485275 MGRN1O60291 552 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 KRT36O76013 467 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 BCHEP06276 602 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 F8A1P23610 371 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 KHKP50053 298 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 EMP2P54851 167 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 MRPS22P82650 360 aaKnown RBP13.53□□□□□ -0.24
LRIF1-202ENST00000485275 CAMK2BQ13554 666 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 SCARB2Q14108 478 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 MYBPC3Q14896 1274 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 SYPL1Q16563 259 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 SFT2D3Q587I9 215 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 CDC73Q6P1J9 531 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 BHLHB9Q6PI77 547 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 NPSR1Q6W5P4 371 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 ANKFN1Q8N957 763 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 C16orf52Q8NHV5 167 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 CDS1Q92903 461 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 SLC35A4Q96G79 324 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 TMEM19Q96HH6 336 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 SENP5Q96HI0 755 aaPredicted RBP13.53□□□□□ -0.24
LRIF1-202ENST00000485275 FBXL20Q96IG2 436 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 VSTM2LQ96N03 204 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 SPATA9Q9BWV2 254 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 RAD21L1Q9H4I0 556 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 A4GALTQ9NPC4 353 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 BCAP29Q9UHQ4 241 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 MAGEL2Q9UJ55 1249 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 ZNF223Q9UK11 482 aaPredicted RBP13.53□□□□□ -0.24
LRIF1-202ENST00000485275 PADI1Q9ULC6 663 aa13.53□□□□□ -0.24
LRIF1-202ENST00000485275 PTRH2Q9Y3E5 179 aaKnown RBP13.53□□□□□ -0.24
LRIF1-202ENST00000485275 TCRBV3S1A0A5B6 114 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 CREG1O75629 220 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 C8BP07358 591 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 TNNI3P19429 210 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 GPR143P51810 404 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 POLE2P56282 527 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 SLC37A1P57057 533 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 PCBP3P57721 371 aaKnown RBP13.52□□□□□ -0.25
LRIF1-202ENST00000485275 CDK6Q00534 326 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 PSG6Q00889 435 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 TMEM164Q5U3C3 297 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 FBXW10Q5XX13 1052 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 SLC44A2Q8IWA5 706 aaPredicted RBP13.52□□□□□ -0.25
LRIF1-202ENST00000485275 C11orf65Q8NCR3 313 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 NFAM1Q8NET5 270 aaPredicted RBP13.52□□□□□ -0.25
LRIF1-202ENST00000485275 OR2Y1Q8NGV0 311 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 XAGE5Q8WWM1 108 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 PYDC1Q8WXC3 89 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 SLC9A6Q92581 669 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 SLCO4A1Q96BD0 722 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 NUDT9Q9BW91 350 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 OR8D2Q9GZM6 311 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 OR10A5Q9H207 317 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 MUC13Q9H3R2 512 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 GORASP2Q9H8Y8 452 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 FOLH1BQ9HBA9 442 aa13.52□□□□□ -0.25
LRIF1-202ENST00000485275 GPN3Q9UHW5 284 aaPredicted RBP13.52□□□□□ -0.25
LRIF1-202ENST00000485275 NXT1Q9UKK6 140 aaKnown RBP13.52□□□□□ -0.25
LRIF1-202ENST00000485275 HEMK1Q9Y5R4 338 aaPredicted RBP13.52□□□□□ -0.25
LRIF1-202ENST00000485275 H3BNX3 289 aa13.51□□□□□ -0.25
LRIF1-202ENST00000485275 CHRM4P08173 479 aa13.51□□□□□ -0.25
LRIF1-202ENST00000485275 TCN2P20062 427 aa13.51□□□□□ -0.25
LRIF1-202ENST00000485275 PRIM2P49643 509 aa13.51□□□□□ -0.25
LRIF1-202ENST00000485275 ZNF155Q12901 538 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms