RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 LRRC3CA6NJW4 275 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 PRSS44E7EML9 344 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 NPIPA2E9PIF3 369 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 NPIPA3F8WFD2 350 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 SLC28A1O00337 649 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 TP53I11O14683 189 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 PIP5K1BO14986 540 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 RGS14O43566 566 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 TYROBPO43914 113 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 SKAP2O75563 359 aaPredicted RBP11.28□□□□□ -0.6
MSH5-216ENST00000484309 CHEK2O96017 543 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 ABCD3P28288 659 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 EMDP50402 254 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 NCBP2P52298 156 aaKnown RBP eCLIP11.28□□□□□ -0.6
MSH5-216ENST00000484309 SH2D4BQ5SQS7 431 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 ANKRD26P1Q6NSI1 321 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 ARHGAP11AQ6P4F7 1023 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 Q6ZSR9 355 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 DND1Q8IYX4 353 aaKnown RBP11.28□□□□□ -0.6
MSH5-216ENST00000484309 OR7G2Q8NG99 324 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.28□□□□□ -0.6
MSH5-216ENST00000484309 SPPL2AQ8TCT8 520 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 ZNF675Q8TD23 568 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 TWIST2Q8WVJ9 160 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 OMA1Q96E52 524 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 LCORQ96JN0 433 aaPredicted RBP11.28□□□□□ -0.6
MSH5-216ENST00000484309 TSSK3Q96PN8 268 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 TRMOQ9BU70 441 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 DOHHQ9BU89 302 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 EXO5Q9H790 373 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 PLSCR2Q9NRY7 297 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 C1orf109Q9NX04 203 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 CNIH4Q9P003 139 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 BOKQ9UMX3 212 aaPredicted RBP11.28□□□□□ -0.6
MSH5-216ENST00000484309 CFL2Q9Y281 166 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 TRAF6Q9Y4K3 522 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 HRH3Q9Y5N1 445 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 DNAJC15Q9Y5T4 150 aa11.28□□□□□ -0.6
MSH5-216ENST00000484309 KIAA1549Q9HCM3 1950 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 PKDREJQ9NTG1 2253 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 HCFC1P51610 2035 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 CAPN14A8MX76 684 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 MYO1GB0I1T2 1018 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 ADAM10O14672 748 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 AKAP10O43572 662 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 LYPLA1O75608 230 aaPredicted RBP11.27□□□□□ -0.61
MSH5-216ENST00000484309 PPM1BO75688 479 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 BPGMP07738 259 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 ABCB1P08183 1280 aaPredicted RBP11.27□□□□□ -0.61
MSH5-216ENST00000484309 SDC1P18827 310 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 PRPH2P23942 346 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 GRNP28799 593 aaKnown RBP11.27□□□□□ -0.61
MSH5-216ENST00000484309 DCTP40126 519 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 MC3RP41968 323 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 ETV4P43268 484 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 GSTM5P46439 218 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 TRPC1P48995 793 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 TMED10P49755 219 aaKnown RBP11.27□□□□□ -0.61
MSH5-216ENST00000484309 CORO7P57737 925 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 PLCXD2Q0VAA5 305 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 ZNF155Q12901 538 aaPredicted RBP11.27□□□□□ -0.61
MSH5-216ENST00000484309 KIAA0040Q15053 153 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 CDSNQ15517 529 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 CES4AQ5XG92 561 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 MTFR2Q6P444 385 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 PAOXQ6QHF9 649 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 TMEM107Q6UX40 140 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 RGS9BPQ6ZS82 235 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 EXOC3L1Q86VI1 746 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 RPRMLQ8N4K4 120 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 ZNF808Q8N4W9 903 aaPredicted RBP11.27□□□□□ -0.61
MSH5-216ENST00000484309 OR5M9Q8NGP3 310 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 FAM76AQ8TAV0 307 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 ZNF597Q96LX8 424 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 RILPQ96NA2 401 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 NODALQ96S42 347 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 SLC6A15Q9H2J7 730 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 LDAHQ9H6V9 325 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 ZNF703Q9H7S9 590 aaPredicted RBP11.27□□□□□ -0.61
MSH5-216ENST00000484309 FOLH1BQ9HBA9 442 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 EML4Q9HC35 981 aaKnown RBP11.27□□□□□ -0.61
MSH5-216ENST00000484309 ZFP64Q9NPA5 681 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 PNPLA3Q9NST1 481 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 PRODH2Q9UF12 536 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 BAIAP2L1Q9UHR4 511 aa11.27□□□□□ -0.61
MSH5-216ENST00000484309 C2orf72A6NCS6 295 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 GNB5O14775 395 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 LSM1O15116 133 aaKnown RBP11.26□□□□□ -0.61
MSH5-216ENST00000484309 CTIFO43310 598 aaKnown RBP11.26□□□□□ -0.61
MSH5-216ENST00000484309 NEFHP12036 1026 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 GDF1P27539 372 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 NTSP30990 170 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 MPIP34949 423 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 PPICP45877 212 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 SERPINB4P48594 390 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 MASP1P48740 699 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 MAN2A2P49641 1150 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 SLC10A1Q14973 349 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 CEBPEQ15744 281 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 HYAL4Q2M3T9 481 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms