RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 CA10Q9NS85 328 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 TMEM184CQ9NVA4 438 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ZNF624Q9P2J8 865 aaPredicted RBP7.41□□□□□ -1.22
COL4A5-205ENST00000483338 DUSP12Q9UNI6 340 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 OR10H1Q9Y4A9 318 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ERI2A8K979 691 aaKnown RBP7.41□□□□□ -1.22
COL4A5-205ENST00000483338 RAB3DO95716 219 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ESR1P03372 595 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 UGT2B7P16662 529 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 AGAP20933 346 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 AHCYP23526 432 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 RABGGTBP53611 331 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 SEC61A1P61619 476 aaKnown RBP7.41□□□□□ -1.22
COL4A5-205ENST00000483338 PEA15Q15121 130 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 OR8G1Q15617 311 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 TRAM1Q15629 374 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 DPYSL2Q16555 572 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 DEFB115Q30KQ5 88 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 SLC39A12Q504Y0 691 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ZNF789Q5FWF6 425 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 SAPCD1Q5SSQ6 148 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 FKBP1CQ5VVH2 108 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 KCTD11Q693B1 232 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 H3F3CQ6NXT2 135 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ZNF613Q6PF04 617 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 PAQR6Q6TCH4 344 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 LYPD4Q6UWN0 246 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 TMEM207Q6UWW9 146 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 PNPLA1Q8N8W4 532 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 CCNYQ8ND76 341 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 S100PBPQ96BU1 408 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 TMPRSS13Q9BYE2 586 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 EGLN1Q9GZT9 426 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 NXF3Q9H4D5 531 aaKnown RBP7.41□□□□□ -1.22
COL4A5-205ENST00000483338 XKR8Q9H6D3 395 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 LHX9Q9NQ69 397 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 SLC6A13Q9NSD5 602 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 DZANK1Q9NVP4 752 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 C2orf42Q9NWW7 574 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 GFOD1Q9NXC2 390 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ACSL6Q9UKU0 697 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ABT1Q9ULW3 272 aaKnown RBP7.41□□□□□ -1.22
COL4A5-205ENST00000483338 TRPV2Q9Y5S1 764 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 MYLKQ15746 1914 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 GABRR3A8MPY1 467 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 J3KR12 359 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 HAS3O00219 553 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 RFXAPO00287 272 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 CACNG3O60359 315 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 FABP3P05413 133 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ODC1P11926 461 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ACPPP15309 386 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 GOT1P17174 413 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ELK1P19419 428 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 CRATP43155 626 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ANXA11P50995 505 aaKnown RBP7.41□□□□□ -1.22
COL4A5-205ENST00000483338 GZMMP51124 257 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 NFKB2Q00653 900 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 SGCGQ13326 291 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 C6orf136Q5SQH8 315 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 MEDAGQ5VYS4 303 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 MTFR2Q6P444 385 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 SSX6Q7RTT6 188 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 C1orf52Q8N6N3 182 aaKnown RBP7.41□□□□□ -1.22
COL4A5-205ENST00000483338 OR2L5Q8NG80 312 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 FEVQ99581 238 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 SUCNR1Q9BXA5 334 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 CACNG6Q9BXT2 260 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ABCG8Q9H221 673 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 REEP1Q9H902 201 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 DUSP22Q9NRW4 184 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 C1orf109Q9NX04 203 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 ALPK3Q96L96 1907 aa7.41□□□□□ -1.22
COL4A5-205ENST00000483338 AGAP14A8MT82 685 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 EEF1E1O43324 174 aaKnown RBP7.4□□□□□ -1.22
COL4A5-205ENST00000483338 SAGP10523 405 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-205ENST00000483338 GJA1P17302 382 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 PRDX3P30048 256 aaKnown RBP7.4□□□□□ -1.22
COL4A5-205ENST00000483338 OR1G1P47890 313 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 CCR9P51686 369 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 CLDN8P56748 225 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 RAB8AP61006 207 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 CLN3Q13286 438 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 DHCR24Q15392 516 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 SLC36A2Q495M3 483 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 FBXO48Q5FWF7 155 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 XKR3Q5GH77 459 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 NCMAPQ5T1S8 102 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 HEPHL1Q6MZM0 1159 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 ALKAL1Q6UXT8 129 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 PYROXD2Q8N2H3 581 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 LRRC18Q8N456 261 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 OR4A15Q8NGL6 344 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 SH3RF2Q8TEC5 729 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 CHTF18Q8WVB6 975 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 ORAI1Q96D31 301 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 PIGQQ9BRB3 760 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 ATG101Q9BSB4 218 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 NAA11Q9BSU3 229 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-205ENST00000483338 NIF3L1Q9GZT8 377 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms