RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 GAB1Q13480 694 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 SPDYE7PQ495Y7 208 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 B3GNTL1Q67FW5 361 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 YTHDF3Q7Z739 585 aaKnown RBP18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 ROPN1LQ96C74 230 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 CTHRC1Q96CG8 243 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 ELP4Q96EB1 424 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 SEMA4CQ9C0C4 833 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 PAIP1Q9H074 479 aaKnown RBP18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 NEUROD4Q9HD90 331 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 GID8Q9NWU2 228 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 VPS4AQ9UN37 437 aa18.5■□□□□ 0.55
TRAPPC12-220ENST00000482645 FXYD1O00168 92 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 CLPSP04118 112 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 S1PR1P21453 382 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 RNF4P78317 190 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 MLC1Q15049 377 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 LACTB2Q53H82 288 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 SLC29A4Q7RTT9 530 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 C9orf40Q8IXQ3 194 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 OR7G1Q8NGA0 311 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 OR5AK3PQ8NH89 298 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 SLC7A6OSQ96CW6 309 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 LRRC58Q96CX6 371 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 TRIM8Q9BZR9 551 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 CXorf36Q9H7Y0 433 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 TAS2R9Q9NYW1 312 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 ZNF639Q9UID6 485 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 EPG5Q9HCE0 2579 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 UPK1AO00322 258 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 PRAMEF2O60811 474 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 ERN1O75460 977 aaKnown RBP18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 ZFAND5O76080 213 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 CPOXP36551 454 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 ST13P50502 369 aaKnown RBP18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 RASSF2P50749 326 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 DUSP8Q13202 625 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 MYBPC3Q14896 1274 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 LRIF1Q5T3J3 769 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 JMJD6Q6NYC1 403 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 C16orf89Q6UX73 402 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 DLEU7Q6UYE1 221 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 HACD2Q6Y1H2 254 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 C16orf47Q6ZP98 133 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 CLEC4FQ8N1N0 589 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 SLC5A8Q8N695 610 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 ZNF615Q8N8J6 731 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 C16orf52Q8NHV5 167 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 C3orf14Q9HBI5 128 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 EQTNQ9NQ60 294 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 SIRT3Q9NTG7 399 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 NDE1Q9NXR1 346 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 VAPAQ9P0L0 249 aa18.49■□□□□ 0.55
TRAPPC12-220ENST00000482645 PLOD2O00469 737 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 GYG2O15488 501 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 PLOD3O60568 738 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 SLITRK5O94991 958 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 FAM87AP0C7U9 286 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 TRPC1P48995 793 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 ITPR1Q14643 2758 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 FHL5Q5TD97 284 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 AGAP7PQ5VUJ5 663 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 TCTN3Q6NUS6 607 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 LINC00696Q6ZRV3 163 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 ZNF621Q6ZSS3 439 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 MSRB3Q8IXL7 192 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 DEFB107AQ8IZN7 70 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 DNAJB8Q8NHS0 232 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 PSMF1Q92530 271 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 AURKBQ96GD4 344 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 AGAP4Q96P64 663 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 CGREF1Q99674 301 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 CDCP1Q9H5V8 836 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 ZCCHC3Q9NUD5 404 aaKnown RBP18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 TAS2R1Q9NYW7 299 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 SLC25A37Q9NYZ2 338 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 ERVK-11Q9UQG0 969 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 DTX4Q9Y2E6 619 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 PCDHB14Q9Y5E9 798 aa18.48■□□□□ 0.55
TRAPPC12-220ENST00000482645 CACNA1GO43497 2377 aa18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 A0A087WV62 115 aa18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 RNF103-CHMP3A0A140T963 221 aa18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 MKRN2OSH3BPM6 223 aa18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 WWP2O00308 870 aa18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 MAN1A2O60476 641 aa18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 COQ9O75208 318 aa18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 BCAS2O75934 225 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 HOXB9P17482 250 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 PTPN6P29350 595 aa18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 SOX8P57073 446 aa18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 PSME3P61289 254 aa18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 PRR5P85299 388 aa18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 ZNF155Q12901 538 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 TP53BP2Q13625 1128 aa18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 NNATQ16517 81 aa18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 HLA-DQA1Q5Y7H0 255 aa18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 PGAM4Q8N0Y7 254 aa18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 OR2L13Q8N349 312 aa18.47■□□□□ 0.55
TRAPPC12-220ENST00000482645 TRIML2Q8N7C3 387 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms