RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 TEX101Q9BY14 249 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 SMURF1Q9HCE7 757 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 CD93Q9NPY3 652 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 TOR4AQ9NXH8 423 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 CNIH4Q9P003 139 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 LSM2Q9Y333 95 aaKnown RBP10.18□□□□□ -0.78
VPS52-217ENST00000478934 KLK4Q9Y5K2 254 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 PEX16Q9Y5Y5 336 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 DNMT3AQ9Y6K1 912 aaPredicted RBP10.18□□□□□ -0.78
VPS52-217ENST00000478934 ISPDA4D126 451 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 SAGE2PA6NJ88 616 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 A8MVJ9 347 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 AIFM1O95831 613 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 CEACAM5P06731 702 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 ETV5P41161 510 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 ETV1P50549 477 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 OLR1P78380 273 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 RUNX3Q13761 415 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 SPHARQ15513 63 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 TMEM31Q5JXX7 168 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 RSBN1Q5VWQ0 802 aaPredicted RBP10.18□□□□□ -0.78
VPS52-217ENST00000478934 C12orf73Q69YU5 71 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 C22orf42Q6IC83 251 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 KIAA1161Q6NSJ0 714 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 CCDC190Q86UF4 302 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 OR4N5Q8IXE1 308 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 SYT14Q8NB59 555 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 KCT2Q8NC54 265 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 OR9Q1Q8NGQ5 310 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 OR9A2Q8NGT5 310 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 ASB15Q8WXK1 588 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 ARMC5Q96C12 935 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 MS4A6EQ96DS6 147 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 ZNF607Q96SK3 696 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 SLC30A2Q9BRI3 323 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 FNDC11Q9BVV2 318 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 MMP28Q9H239 520 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 MRPS30Q9NP92 439 aaKnown RBP10.18□□□□□ -0.78
VPS52-217ENST00000478934 PRDM7Q9NQW5 492 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 TMEM74BQ9NUR3 256 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 P2RX2Q9UBL9 471 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 APOBEC3BQ9UH17 382 aaKnown RBP10.18□□□□□ -0.78
VPS52-217ENST00000478934 BOLA1Q9Y3E2 137 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 ASB4Q9Y574 426 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 SH3D21A4FU49 640 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 FAAHO00519 579 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 FCMRO60667 390 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 CCNKO75909 580 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 CH25HO95992 272 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 MC3RP41968 323 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 RAB28P51157 221 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 IFITM2Q01629 132 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 CHRNEQ04844 493 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 GPM6BQ13491 265 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 TOR1AIP1Q5JTV8 583 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 C19orf48Q6RUI8 117 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 RD3Q7Z3Z2 195 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 ABI3BPQ7Z7G0 1075 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 IL17RDQ8NFM7 739 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 OR14C36Q8NHC7 312 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 TMEM80Q96HE8 168 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 TXNDC15Q96J42 360 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 LRR1Q96L50 414 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 BEX2Q9BXY8 128 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 HOXD1Q9GZZ0 328 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 TP63Q9H3D4 680 aaPredicted RBP10.17□□□□□ -0.78
VPS52-217ENST00000478934 MGAT4BQ9UQ53 548 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 CHST2Q9Y4C5 530 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 A0A1W2PQU0 124 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 CPSF4LA6NMK7 179 aaKnown RBP10.17□□□□□ -0.78
VPS52-217ENST00000478934 COQ9O75208 318 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 CDRT1O95170 752 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 ZIC2O95409 532 aaPredicted RBP10.17□□□□□ -0.78
VPS52-217ENST00000478934 PTTG1O95997 202 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 RPN2P04844 631 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 AK4P27144 223 aaPredicted RBP10.17□□□□□ -0.78
VPS52-217ENST00000478934 CRYBB2P43320 205 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 MAN2A2P49641 1150 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 SNRPGP62308 76 aaKnown RBP10.17□□□□□ -0.78
VPS52-217ENST00000478934 INSL4Q14641 139 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 SLC9A5Q14940 896 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 ZNF79Q15937 498 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 ATAT1Q5SQI0 421 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 C6orf132Q5T0Z8 1188 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 ABHD17CQ6PCB6 329 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 PRICKLE2Q7Z3G6 844 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 TMEFF1Q8IYR6 380 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 MORN4Q8NDC4 146 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 OR4E2Q8NGC2 313 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 OR8D4Q8NGM9 314 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 CCL4L1Q8NHW4 92 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 KLHL6Q8WZ60 621 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 COL26A1Q96A83 441 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 DHRS1Q96LJ7 313 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 ANKHQ9HCJ1 492 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 CNOT2Q9NZN8 540 aaKnown RBP10.17□□□□□ -0.78
VPS52-217ENST00000478934 ACAD8Q9UKU7 415 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 CFL2Q9Y281 166 aa10.17□□□□□ -0.78
VPS52-217ENST00000478934 C2orf16Q68DN1 1984 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 ARRDC5A6NEK1 342 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms