RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 MKKSQ9NPJ1 570 aaPredicted RBP13.45□□□□□ -0.26
USP11-207ENST00000478596 C14orf105Q9NVL8 296 aa13.45□□□□□ -0.26
USP11-207ENST00000478596 ZANQ9Y493 2812 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 TMPRSS11DO60235 418 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 SHOX2O60902 331 aaPredicted RBP13.44□□□□□ -0.26
USP11-207ENST00000478596 LRATO95237 230 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 IL3P08700 152 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 PRPS2P11908 318 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 ZNF24P17028 368 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 SDC1P18827 310 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 TPP2P29144 1249 aaPredicted RBP13.44□□□□□ -0.26
USP11-207ENST00000478596 CD96P40200 585 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 GSTM5P46439 218 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 ASMTP46597 345 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 LIM2P55344 173 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 NME5P56597 212 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 TAS2R50P59544 299 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 SNRPNP63162 240 aaKnown RBP13.44□□□□□ -0.26
USP11-207ENST00000478596 TNFRSF17Q02223 184 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 OR1C1Q15619 314 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 LSM12Q3MHD2 195 aaKnown RBP13.44□□□□□ -0.26
USP11-207ENST00000478596 RFTN2Q52LD8 501 aaPredicted RBP13.44□□□□□ -0.26
USP11-207ENST00000478596 RNFT1Q5M7Z0 435 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 ACER2Q5QJU3 275 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 CGB2Q6NT52 195 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 FAM9CQ8IZT9 166 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 ARHGEF39Q8N4T4 335 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 AMER3Q8N944 861 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 OR51Q1Q8NH59 317 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 MAPKAP1Q9BPZ7 522 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 CCDC28BQ9BUN5 200 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 TP63Q9H3D4 680 aaPredicted RBP13.44□□□□□ -0.26
USP11-207ENST00000478596 PRDM7Q9NQW5 492 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 MS4A12Q9NXJ0 267 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 DLGAP4Q9Y2H0 992 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 CCL27Q9Y4X3 112 aa13.44□□□□□ -0.26
USP11-207ENST00000478596 A6NNC1 897 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 NDUFAB1O14561 156 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 AKAP10O43572 662 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 B4GALT2O60909 372 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 SCELO95171 688 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 AIFM1O95831 613 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 SMIM10L1P0DMW3 83 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 BCKDHAP12694 445 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 IDO1P14902 403 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 DDX5P17844 614 aaKnown RBP13.43□□□□□ -0.26
USP11-207ENST00000478596 PTGER1P34995 402 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 HNRNPH2P55795 449 aaKnown RBP13.43□□□□□ -0.26
USP11-207ENST00000478596 TRA2BP62995 288 aaKnown RBP13.43□□□□□ -0.26
USP11-207ENST00000478596 RAE1P78406 368 aaKnown RBP13.43□□□□□ -0.26
USP11-207ENST00000478596 NKX6-1P78426 367 aaPredicted RBP13.43□□□□□ -0.26
USP11-207ENST00000478596 EMX2Q04743 252 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 SLC13A2Q13183 592 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 HEPACAMQ14CZ8 416 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 SMU1Q2TAY7 513 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 NDUFAF5Q5TEU4 345 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 GKAP1Q5VSY0 366 aaPredicted RBP13.43□□□□□ -0.26
USP11-207ENST00000478596 SPINK14Q6IE38 97 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 OR52E8Q6IFG1 317 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 H3F3CQ6NXT2 135 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 GALNTL5Q7Z4T8 443 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.43□□□□□ -0.26
USP11-207ENST00000478596 C16orf78Q8WTQ4 265 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 GFM2Q969S9 779 aaKnown RBP13.43□□□□□ -0.26
USP11-207ENST00000478596 TBC1D20Q96BZ9 403 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 SMIM10Q96HG1 83 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 MAELQ96JY0 434 aaKnown RBP13.43□□□□□ -0.26
USP11-207ENST00000478596 ZNF354BQ96LW1 612 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 CSF3RQ99062 836 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 UTP23Q9BRU9 249 aaKnown RBP13.43□□□□□ -0.26
USP11-207ENST00000478596 TUBB6Q9BUF5 446 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 ZNF717Q9BY31 904 aaPredicted RBP13.43□□□□□ -0.26
USP11-207ENST00000478596 DPY30Q9C005 99 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 CLK4Q9HAZ1 481 aaKnown RBP13.43□□□□□ -0.26
USP11-207ENST00000478596 MYNNQ9NPC7 610 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 GIMAP4Q9NUV9 329 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 TEX10Q9NXF1 929 aaPredicted RBP13.43□□□□□ -0.26
USP11-207ENST00000478596 DAPP1Q9UN19 280 aa13.43□□□□□ -0.26
USP11-207ENST00000478596 GLOD5A6NK44 160 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 A8MUI8 341 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 NPIPB8E9PQR5 432 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 CLDN4O14493 209 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 ZNF195O14628 629 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 PRKRAO75569 313 aaKnown RBP13.42□□□□□ -0.26
USP11-207ENST00000478596 FAM107AO95990 144 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 HEXBP07686 556 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 FHP07954 510 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 SP1P08047 785 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 G6PDP11413 515 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 COX7A2P14406 83 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 RPL3P39023 403 aaKnown RBP13.42□□□□□ -0.26
USP11-207ENST00000478596 PEX19P40855 299 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 KIR2DL3P43628 341 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 ACTN3Q08043 901 aaPredicted RBP13.42□□□□□ -0.26
USP11-207ENST00000478596 C2orf80Q0P641 193 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 PMPCAQ10713 525 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 RUNX2Q13950 521 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 PTGR1Q14914 329 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 OGFOD2Q6N063 350 aa13.42□□□□□ -0.26
USP11-207ENST00000478596 GALNT18Q6P9A2 607 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms