RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 COQ9O75208 318 aa24.76■■□□□ 1.55
CCM2-211ENST00000478582 PSMG1O95456 288 aa24.76■■□□□ 1.55
CCM2-211ENST00000478582 NADKO95544 446 aaPredicted RBP24.76■■□□□ 1.55
CCM2-211ENST00000478582 TROVE2P10155 538 aaKnown RBP eCLIP24.76■■□□□ 1.55
CCM2-211ENST00000478582 KIR3DL1P43629 444 aa24.76■■□□□ 1.55
CCM2-211ENST00000478582 CYB561P49447 251 aa24.76■■□□□ 1.55
CCM2-211ENST00000478582 WNT3P56703 355 aa24.76■■□□□ 1.55
CCM2-211ENST00000478582 DCAF7P61962 342 aa24.76■■□□□ 1.55
CCM2-211ENST00000478582 TMEM156Q8N614 296 aa24.76■■□□□ 1.55
CCM2-211ENST00000478582 MDS2Q8NDY4 140 aa24.76■■□□□ 1.55
CCM2-211ENST00000478582 SLC22A8Q8TCC7 542 aa24.76■■□□□ 1.55
CCM2-211ENST00000478582 THOC1Q96FV9 657 aaKnown RBP24.76■■□□□ 1.55
CCM2-211ENST00000478582 TAS2R9Q9NYW1 312 aa24.76■■□□□ 1.55
CCM2-211ENST00000478582 DCTN4Q9UJW0 460 aa24.76■■□□□ 1.55
CCM2-211ENST00000478582 DTX4Q9Y2E6 619 aa24.76■■□□□ 1.55
CCM2-211ENST00000478582 RNASET2O00584 256 aaKnown RBP24.75■■□□□ 1.55
CCM2-211ENST00000478582 ZNF354AO60765 605 aaPredicted RBP24.75■■□□□ 1.55
CCM2-211ENST00000478582 SCN2BO60939 215 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 SLC22A3O75751 556 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 F10P00742 488 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 IL12AP29459 219 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 GPC1P35052 558 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 PPICP45877 212 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 CDK9P50750 372 aaKnown RBP24.75■■□□□ 1.55
CCM2-211ENST00000478582 NME5P56597 212 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 PHC1P78364 1004 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 ZNF169Q14929 603 aaPredicted RBP24.75■■□□□ 1.55
CCM2-211ENST00000478582 OR1C1Q15619 314 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 PRR30Q53SZ7 412 aaPredicted RBP24.75■■□□□ 1.55
CCM2-211ENST00000478582 OR4F3Q6IEY1 312 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 OPN5Q6U736 354 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 HORMAD2Q8N7B1 307 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 MARK4Q96L34 752 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 ZBTB18Q99592 522 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.75■■□□□ 1.551e-8■■■■□ 21.4
CCM2-211ENST00000478582 SIRT3Q9NTG7 399 aaPredicted RBP24.75■■□□□ 1.55
CCM2-211ENST00000478582 DDX18Q9NVP1 670 aaKnown RBP24.75■■□□□ 1.55
CCM2-211ENST00000478582 ANKRD10Q9NXR5 420 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 LRFN1Q9P244 771 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 PCDHGB6Q9Y5F9 930 aa24.75■■□□□ 1.55
CCM2-211ENST00000478582 SHANK1Q9Y566 2161 aa24.74■■□□□ 1.55
CCM2-211ENST00000478582 NEURL1O76050 574 aa24.74■■□□□ 1.55
CCM2-211ENST00000478582 EFNA1P20827 205 aaPredicted RBP24.74■■□□□ 1.55
CCM2-211ENST00000478582 DRD5P21918 477 aa24.74■■□□□ 1.55
CCM2-211ENST00000478582 OC90Q02509 493 aaPredicted RBP24.74■■□□□ 1.55
CCM2-211ENST00000478582 SPANXN4Q5MJ08 99 aa24.74■■□□□ 1.55
CCM2-211ENST00000478582 ANXA8L1Q5VT79 327 aa24.74■■□□□ 1.55
CCM2-211ENST00000478582 CGB2Q6NT52 195 aa24.74■■□□□ 1.55
CCM2-211ENST00000478582 LYPD8Q6UX82 237 aa24.74■■□□□ 1.55
CCM2-211ENST00000478582 ZNF227Q86WZ6 799 aa24.74■■□□□ 1.55
CCM2-211ENST00000478582 TAGAPQ8N103 731 aa24.74■■□□□ 1.55
CCM2-211ENST00000478582 MIER2Q8N344 545 aa24.74■■□□□ 1.55
CCM2-211ENST00000478582 ASB15Q8WXK1 588 aa24.74■■□□□ 1.55
CCM2-211ENST00000478582 SNRNP40Q96DI7 357 aaKnown RBP24.74■■□□□ 1.55
CCM2-211ENST00000478582 VSTM2LQ96N03 204 aa24.74■■□□□ 1.55
CCM2-211ENST00000478582 SIGLEC12Q96PQ1 595 aa24.74■■□□□ 1.55
CCM2-211ENST00000478582 ITPAQ9BY32 194 aa24.74■■□□□ 1.55
CCM2-211ENST00000478582 GPR55Q9Y2T6 319 aaPredicted RBP24.74■■□□□ 1.55
CCM2-211ENST00000478582 CNTRLQ7Z7A1 2325 aa24.74■■□□□ 1.55
CCM2-211ENST00000478582 PRSS51A0A1B0GVH4 220 aa24.73■■□□□ 1.55
CCM2-211ENST00000478582 C6orf47O95873 294 aa24.73■■□□□ 1.55
CCM2-211ENST00000478582 S100A3P33764 101 aa24.73■■□□□ 1.55
CCM2-211ENST00000478582 SOX3P41225 446 aa24.73■■□□□ 1.55
CCM2-211ENST00000478582 ST13P50502 369 aaKnown RBP24.73■■□□□ 1.55
CCM2-211ENST00000478582 NR0B1P51843 470 aaKnown RBP24.73■■□□□ 1.55
CCM2-211ENST00000478582 FAM174BQ3ZCQ3 159 aa24.73■■□□□ 1.55
CCM2-211ENST00000478582 SPINK14Q6IE38 97 aa24.73■■□□□ 1.55
CCM2-211ENST00000478582 RPUSD3Q6P087 351 aaKnown RBP24.73■■□□□ 1.55
CCM2-211ENST00000478582 CISD2Q8N5K1 135 aaKnown RBP24.73■■□□□ 1.55
CCM2-211ENST00000478582 VPS37AQ8NEZ2 397 aa24.73■■□□□ 1.55
CCM2-211ENST00000478582 HSPBAP1Q96EW2 488 aa24.73■■□□□ 1.55
CCM2-211ENST00000478582 LCORQ96JN0 433 aaPredicted RBP24.73■■□□□ 1.55
CCM2-211ENST00000478582 BTBD9Q96Q07 612 aa24.73■■□□□ 1.55
CCM2-211ENST00000478582 NXF5Q9H1B4 397 aaKnown RBP24.73■■□□□ 1.55
CCM2-211ENST00000478582 FOLH1BQ9HBA9 442 aa24.73■■□□□ 1.55
CCM2-211ENST00000478582 C3orf14Q9HBI5 128 aa24.73■■□□□ 1.55
CCM2-211ENST00000478582 NEUROD4Q9HD90 331 aa24.73■■□□□ 1.55
CCM2-211ENST00000478582 SPENQ96T58 3664 aaKnown RBP24.72■■□□□ 1.55
CCM2-211ENST00000478582 A0A0G2JND7 137 aa24.72■■□□□ 1.55
CCM2-211ENST00000478582 A8MVJ9 347 aa24.72■■□□□ 1.55
CCM2-211ENST00000478582 EMC8O43402 210 aa24.72■■□□□ 1.55
CCM2-211ENST00000478582 OR6B1O95007 311 aa24.72■■□□□ 1.55
CCM2-211ENST00000478582 ZFP36L2P47974 494 aaKnown RBP24.72■■□□□ 1.55
CCM2-211ENST00000478582 ATP4BP51164 291 aa24.72■■□□□ 1.55
CCM2-211ENST00000478582 TMEM64Q6YI46 380 aa24.72■■□□□ 1.55
CCM2-211ENST00000478582 DND1Q8IYX4 353 aaKnown RBP24.72■■□□□ 1.55
CCM2-211ENST00000478582 TMEM45AQ9NWC5 275 aa24.72■■□□□ 1.55
CCM2-211ENST00000478582 HPF1Q9NWY4 346 aa24.72■■□□□ 1.55
CCM2-211ENST00000478582 FAM120CQ9NX05 1096 aaKnown RBP24.72■■□□□ 1.55
CCM2-211ENST00000478582 FAM53CQ9NYF3 392 aa24.72■■□□□ 1.55
CCM2-211ENST00000478582 MAP10Q9P2G4 905 aa24.72■■□□□ 1.55
CCM2-211ENST00000478582 PCDHGA10Q9Y5H3 936 aa24.72■■□□□ 1.55
CCM2-211ENST00000478582 CLEC18AA5D8T8 446 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 FRG2CA6NGY1 282 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 TO15178 435 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 ACOX3O15254 700 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 ERN1O75460 977 aaKnown RBP24.71■■□□□ 1.55
CCM2-211ENST00000478582 IL6P05231 212 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 PGRP06401 933 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 NRG3P56975 720 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms