RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ULK1O75385 1050 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 SUPT7LO94864 414 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 ABCB1P08183 1280 aaPredicted RBP13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 ABHD2P08910 425 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 CYP4B1P13584 511 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 DRD2P14416 443 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 OPRM1P35372 400 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 FEN1P39748 380 aaKnown RBP13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 PPICP45877 212 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 ART1P52961 327 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 NAA20P61599 178 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 CLCQ05315 142 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 ACSM2AQ08AH3 577 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 GALNT1Q10472 559 aaPredicted RBP13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 HEPACAMQ14CZ8 416 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 FBXL19-AS1Q494R0 122 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 FLYWCH1Q4VC44 716 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 FBXW10Q5XX13 1052 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 ACSM2BQ68CK6 577 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 VASNQ6EMK4 673 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 LETMD1Q6P1Q0 360 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 ANGPTL8Q6UXH0 198 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 GPRIN3Q6ZVF9 776 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 LIX1LQ8IVB5 337 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 ZZZ3Q8IYH5 903 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 PRR22Q8IZ63 422 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 C1orf52Q8N6N3 182 aaKnown RBP13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 GOT1L1Q8NHS2 421 aaPredicted RBP13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 DCAKDQ8WVC6 231 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 ABTB1Q969K4 478 aaPredicted RBP13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 OMA1Q96E52 524 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 ZFP3Q96NJ6 502 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 GNRHR2Q96P88 292 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 ZNF382Q96SR6 550 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 CALHM2Q9HA72 323 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 FETUBQ9UGM5 382 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 TEP1Q99973 2627 aaKnown RBP13.21□□□□□ -0.3
SMARCE1-209ENST00000478349 TACC2O95359 2948 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 PRAMEF25A6NGN4 478 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 GNB5O14775 395 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 SNPHO15079 494 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 CBR3O75828 277 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 ENO1P06733 434 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 DRD5P21918 477 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 ATP5F1P24539 256 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 PTPN6P29350 595 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 CEACAM8P31997 349 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 CDH13P55290 713 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 PKNOX1P55347 436 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 EEF1A1P68104 462 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 SORDQ00796 357 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 EFR3AQ14156 821 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 NNATQ16517 81 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 EEF1A1P5Q5VTE0 462 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 BICRALQ6AI39 1079 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 AAGABQ6PD74 315 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 TRMT10CQ7L0Y3 403 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 CDYL2Q8N8U2 506 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 ADCY4Q8NFM4 1077 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 OR52R1Q8NGF1 315 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 OR14L1PQ8NHC6 308 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 METTL6Q8TCB7 284 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 ZNF675Q8TD23 568 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 CCDC126Q96EE4 140 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 COL21A1Q96P44 957 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 TRIB1Q96RU8 372 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 UGT2B28Q9BY64 529 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 STMN4Q9H169 189 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 CLEC4MQ9H2X3 399 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 FARSBQ9NSD9 589 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 CES1P1Q9UKY3 287 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 PLLPQ9Y342 182 aa13.2□□□□□ -0.3
SMARCE1-209ENST00000478349 DCHS2Q6V1P9 2916 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 ZNF407Q9C0G0 2248 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 A0A1W2PS29 197 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 MBD3L4A6NDZ8 208 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 MBD3L3A6NE82 208 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 OR6C70A6NIJ9 312 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 MBD3L5A6NJ08 208 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 EEF1E1-BLOC1S5C9J1V9 151 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 H0Y3Z8 333 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 H3BQF6 201 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 MANBAO00462 879 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 TO15178 435 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 EEF1E1O43324 174 aaKnown RBP13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 PCDH7O60245 1069 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 ERN1O75460 977 aaKnown RBP13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 CTAG2O75638 210 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 SLITRK5O94991 958 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 OR4F21O95013 312 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 IL18BPO95998 194 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 GSTA1P08263 222 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 BMP7P18075 431 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 S1PR1P21453 382 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 CTSSP25774 331 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 IL12BP29460 328 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 DNAJA1P31689 397 aaKnown RBP13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 MPIP34949 423 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 HSD17B3P37058 310 aa13.19□□□□□ -0.3
SMARCE1-209ENST00000478349 DLX5P56178 289 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms