RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 CORO6Q6QEF8 472 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 LRRC31Q6UY01 552 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 TMEM150AQ86TG1 271 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 NT5DC3Q86UY8 548 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 RCOR2Q8IZ40 523 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 CCDC89Q8N998 374 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 ZNF383Q8NA42 475 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 TDRD5Q8NAT2 981 aaKnown RBP3.49□□□□□ -1.85
UBR3-209ENST00000477461 TMEM178AQ8NBL3 297 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 KCTD6Q8NC69 237 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 KBTBD8Q8NFY9 601 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 OR1J1Q8NGS3 322 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 OR13J1Q8NGT2 312 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 KIF18AQ8NI77 898 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 ITFG1Q8TB96 612 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.49□□□□□ -1.85
UBR3-209ENST00000477461 NT5C3BQ969T7 300 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 NTAN1Q96AB6 310 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 PGAP3Q96FM1 320 aaPredicted RBP3.49□□□□□ -1.85
UBR3-209ENST00000477461 RBM41Q96IZ5 413 aaKnown RBP3.49□□□□□ -1.85
UBR3-209ENST00000477461 BTN2A3PQ96KV6 586 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 GUCD1Q96NT3 240 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 AGAP3Q96P47 875 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 ZNF300Q96RE9 604 aaPredicted RBP3.49□□□□□ -1.85
UBR3-209ENST00000477461 CYP2S1Q96SQ9 504 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 NAPGQ99747 312 aaPredicted RBP3.49□□□□□ -1.85
UBR3-209ENST00000477461 SNRNP25Q9BV90 132 aaKnown RBP3.49□□□□□ -1.85
UBR3-209ENST00000477461 CALN1Q9BXU9 219 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 PITPNM3Q9BZ71 974 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 TRIM7Q9C029 511 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 LAT2Q9GZY6 243 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 GOLPH3Q9H4A6 298 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 DHX35Q9H5Z1 703 aaKnown RBP3.49□□□□□ -1.85
UBR3-209ENST00000477461 ZFP14Q9HCL3 533 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 SERINC1Q9NRX5 453 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 PIGVQ9NUD9 493 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.49□□□□□ -1.85
UBR3-209ENST00000477461 B3GAT1Q9P2W7 334 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 CDH7Q9ULB5 785 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 PACSIN2Q9UNF0 486 aaPredicted RBP3.49□□□□□ -1.85
UBR3-209ENST00000477461 HYOU1Q9Y4L1 999 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 ZFP37Q9Y6Q3 630 aaPredicted RBP3.49□□□□□ -1.85
UBR3-209ENST00000477461 CROCCQ5TZA2 2017 aa3.49□□□□□ -1.85
UBR3-209ENST00000477461 DOCK8Q8NF50 2099 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 BRWD1Q9NSI6 2320 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 DENND4AQ7Z401 1863 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 IGLV7-46A0A075B6I9 117 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 IGHV4-4A0A075B6R2 117 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 LOC101059948A0A1B0GTJ6 334 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 A0A1W2PPM1 405 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 TRBC2A0A5B9 178 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 F5H5T6 163 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 SLCO1B7G3V0H7 640 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 PI4K2BG5E9Z4 385 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 EEF2KO00418 725 aaKnown RBP3.48□□□□□ -1.85
UBR3-209ENST00000477461 MBTPS2O43462 519 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 ACSL4O60488 711 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 PLOD3O60568 738 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 OLFM2O95897 454 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 IGLV3-25P01717 112 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 IGHV2-70P01814 119 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 FAM157CP0CG43 387 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 ACADSP16219 412 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 TCP1P17987 556 aaKnown RBP3.48□□□□□ -1.85
UBR3-209ENST00000477461 CA4P22748 312 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 CA6P23280 308 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 KDELR1P24390 212 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 CTNNA1P35221 906 aaKnown RBP3.48□□□□□ -1.85
UBR3-209ENST00000477461 PGFP49763 221 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 SLC25A11Q02978 314 aaKnown RBP3.48□□□□□ -1.85
UBR3-209ENST00000477461 TFDP2Q14188 446 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 TOMM20Q15388 145 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 TAF13Q15543 124 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 MPPE1Q53F39 396 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 PDLIM3Q53GG5 364 aaPredicted RBP3.48□□□□□ -1.85
UBR3-209ENST00000477461 FAM78AQ5JUQ0 283 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 RABGAP1LQ5R372 815 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 MFSD4BQ5TF39 518 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 RWDD4Q6NW29 188 aaKnown RBP3.48□□□□□ -1.85
UBR3-209ENST00000477461 SYT10Q6XYQ8 523 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 RBPMS2Q6ZRY4 209 aaKnown RBP3.48□□□□□ -1.85
UBR3-209ENST00000477461 CAMKMTQ7Z624 323 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 PSTKQ8IV42 348 aaKnown RBP3.48□□□□□ -1.85
UBR3-209ENST00000477461 KATNAL2Q8IYT4 538 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 LGI2Q8N0V4 545 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 CCDC185Q8N715 623 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 MAPKAPK5-AS1Q8N8E1 139 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 NPEPL1Q8NDH3 523 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 TEKT4Q8WW24 435 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 MAIP1Q8WWC4 291 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 FGF13Q92913 245 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 SMARCD2Q92925 531 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 AZIN2Q96A70 460 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 OTUB2Q96DC9 234 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 TBC1D31Q96DN5 1066 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 SPDL1Q96EA4 605 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 TMA16Q96EY4 203 aaKnown RBP3.48□□□□□ -1.85
UBR3-209ENST00000477461 MAGED4Q96JG8 741 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 RPGRIP1Q96KN7 1286 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 RPRD1AQ96P16 312 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms