RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 IGKV3D-11A0A0A0MRZ8 115 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 EFCAB7A8K855 629 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 C5orf58C9J3I9 102 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 ASNA1O43681 348 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 DIRAS1O95057 198 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 CST1P01037 141 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 NR2F1P10589 423 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 CCL4P13236 92 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 CD247P20963 164 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 FBLP22087 321 aaKnown RBP13.48□□□□□ -0.25
COL4A6-206ENST00000477085 OR1E2P47887 323 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 RHAGQ02094 409 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 PPP1R8Q12972 351 aaKnown RBP13.48□□□□□ -0.25
COL4A6-206ENST00000477085 ELOAQ14241 798 aaKnown RBP13.48□□□□□ -0.25
COL4A6-206ENST00000477085 NRF1Q16656 503 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 HEPHL1Q6MZM0 1159 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 NAXDQ8IW45 347 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 VWA5B2Q8N398 1253 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 OR52R1Q8NGF1 315 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 APOBEC4Q8WW27 367 aaKnown RBP13.48□□□□□ -0.25
COL4A6-206ENST00000477085 CDS1Q92903 461 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 TSLPQ969D9 159 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 POP5Q969H6 163 aaKnown RBP13.48□□□□□ -0.25
COL4A6-206ENST00000477085 PMEPA1Q969W9 287 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 ZNF570Q96NI8 536 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 OR1F2PQ96R84 312 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 WFDC6Q9BQY6 131 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 CTSFQ9UBX1 484 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 RARRES3Q9UL19 164 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 GPC6Q9Y625 555 aaPredicted RBP13.48□□□□□ -0.25
COL4A6-206ENST00000477085 CACNA1HO95180 2353 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 CFAP54Q96N23 3096 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 DLGAP1O14490 977 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 FCMRO60667 390 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 SCRG1O75711 98 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 SLITRK5O94991 958 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 H6PDO95479 791 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 CLPSP04118 112 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 IFI6P09912 130 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 SSTR4P31391 388 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 EMDP50402 254 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 PUM1Q14671 1186 aaKnown RBP eCLIP13.48□□□□□ -0.25
COL4A6-206ENST00000477085 ARHGAP40Q5TG30 622 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 ZNF385CQ66K41 422 aaPredicted RBP13.48□□□□□ -0.25
COL4A6-206ENST00000477085 LCN10Q6JVE6 187 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 PPP4R4Q6NUP7 873 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 PATL1Q86TB9 770 aaKnown RBP13.48□□□□□ -0.25
COL4A6-206ENST00000477085 GALNT12Q8IXK2 581 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 CBR4Q8N4T8 237 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 AMER2Q8N7J2 671 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 SLC9A6Q92581 669 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 HOXB13Q92826 284 aaPredicted RBP13.48□□□□□ -0.25
COL4A6-206ENST00000477085 TMBIM1Q969X1 311 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 RBM18Q96H35 190 aaKnown RBP13.48□□□□□ -0.25
COL4A6-206ENST00000477085 VPS50Q96JG6 964 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 PTCHD1Q96NR3 888 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 DGAT2Q96PD7 388 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 EDEM2Q9BV94 578 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 QRSL1Q9H0R6 528 aaKnown RBP13.48□□□□□ -0.25
COL4A6-206ENST00000477085 SLC38A1Q9H2H9 487 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 BCL2L10Q9HD36 194 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 SEMA4GQ9NTN9 838 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 GIN1Q9NXP7 522 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 DNAJB9Q9UBS3 223 aa13.48□□□□□ -0.25
COL4A6-206ENST00000477085 CNOT11Q9UKZ1 510 aaKnown RBP13.48□□□□□ -0.25
COL4A6-206ENST00000477085 DEAF1O75398 565 aaPredicted RBP13.47□□□□□ -0.25
COL4A6-206ENST00000477085 EPPINO95925 133 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 FGF5P12034 268 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 FUT4P22083 530 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 TGM1P22735 817 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 CHRNEQ04844 493 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 TRA2AQ13595 282 aaKnown RBP eCLIP13.47□□□□□ -0.25
COL4A6-206ENST00000477085 TAF11Q15544 211 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 SWT1Q5T5J6 900 aaKnown RBP13.47□□□□□ -0.25
COL4A6-206ENST00000477085 ANKRD34AQ69YU3 496 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 ZBTB49Q6ZSB9 765 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 PIWIL3Q7Z3Z3 882 aaKnown RBP13.47□□□□□ -0.25
COL4A6-206ENST00000477085 PRSS58Q8IYP2 241 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 HS3ST5Q8IZT8 346 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 METTL25Q8N6Q8 603 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 ADAMTS15Q8TE58 950 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 PTPMT1Q8WUK0 201 aaPredicted RBP13.47□□□□□ -0.25
COL4A6-206ENST00000477085 COL21A1Q96P44 957 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 BDH2Q9BUT1 245 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 VCX3BQ9H321 246 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 YY1AP1Q9H869 796 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 AKIRIN1Q9H9L7 192 aaPredicted RBP13.47□□□□□ -0.25
COL4A6-206ENST00000477085 NDUFAF4Q9P032 175 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 SRPK3Q9UPE1 567 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 DTX4Q9Y2E6 619 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 FER1L5A0AVI2 2057 aa13.47□□□□□ -0.25
COL4A6-206ENST00000477085 A8MVJ9 347 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 FABP3P05413 133 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 ZNF28P17035 718 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 CSTF2P33240 577 aaKnown RBP eCLIP13.46□□□□□ -0.25
COL4A6-206ENST00000477085 CLDN6P56747 220 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 ZNF267Q14586 743 aaPredicted RBP13.46□□□□□ -0.25
COL4A6-206ENST00000477085 MINDY4Q4G0A6 757 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 GPAT3Q53EU6 434 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 QSOX2Q6ZRP7 698 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms