RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-218	ENST00000475445	KRT73	Q86Y46	540 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	SNX29P2	Q8IUI4	249 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	GALNT12	Q8IXK2	581 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	TREX2	Q9BQ50	279 aa	Predicted RBP	13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	SLC25A19	Q9HC21	320 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	ZDHHC4	Q9NPG8	344 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	RPRD1B	Q9NQG5	326 aa	Known RBP	13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	SEMA3G	Q9NS98	782 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	STON1	Q9Y6Q2	735 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	NIN	Q8N4C6	2090 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	ATG2A	Q2TAZ0	1938 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	LRIT2	A6NDA9	550 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	SAGE2P	A6NJ88	616 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	OR7A10	O76100	309 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	CA3	P07451	260 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	ACP5	P13686	325 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	NTS	P30990	170 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	MLLT3	P42568	568 aa	Predicted RBP	13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	KHK	P50053	298 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	ARFIP1	P53367	373 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	GPM6B	Q13491	265 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	SEC23B	Q15437	767 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	MLF2	Q15773	248 aa	Predicted RBP	13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	ZIC1	Q15915	447 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	C12orf73	Q69YU5	71 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	C19orf48	Q6RUI8	117 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	ADCK2	Q7Z695	626 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	LINC00518	Q8N0U6	118 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	OR2A1	Q8NGT9	310 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	BBS10	Q8TAM1	723 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	SFXN5	Q8TD22	340 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	AMDHD1	Q96NU7	426 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	FUZ	Q9BT04	418 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	RACGAP1	Q9H0H5	632 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	OR51I1	Q9H343	314 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	GLIPR2	Q9H4G4	154 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	SLC35C2	Q9NQQ7	365 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	DDX28	Q9NUL7	540 aa	Known RBP	13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	TOR4A	Q9NXH8	423 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	MRPL39	Q9NYK5	338 aa	Known RBP	13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	NPAP1	Q9NZP6	1156 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	SLC6A14	Q9UN76	642 aa		13.56	□□□□□ -0.24
GGA1-218	ENST00000475445	OR10H3	O60404	316 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	SEMA7A	O75326	666 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	OR5F1	O95221	314 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	POU1F1	P28069	291 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	GRK5	P34947	590 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	GPC1	P35052	558 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	ENPP2	Q13822	863 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	ESCO2	Q56NI9	601 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	VIT	Q6UXI7	678 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	DEF8	Q6ZN54	512 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	NLGN4X	Q8N0W4	816 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	LINC00471	Q8N535	108 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	TBC1D19	Q8N5T2	526 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	TP53I13	Q8NBR0	393 aa	Predicted RBP	13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	SECISBP2	Q96T21	854 aa	Known RBP	13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	SPATA5L1	Q9BVQ7	753 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	BCL2L10	Q9HD36	194 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	OR1A2	Q9Y585	309 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	SNX11	Q9Y5W9	270 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	MYO10	Q9HD67	2058 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	IGKV1-8	A0A0C4DH67	115 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	AGAP5	A6NIR3	686 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	FAM227A	F5H4B4	570 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	OR12D1	P0DN82	309 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	CSTF2	P33240	577 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	ALDH6A1	Q02252	535 aa	Known RBP	13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	TANGO2	Q6ICL3	276 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	PGBD2	Q6P3X8	592 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	NUDT18	Q6ZVK8	323 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	HDDC3	Q8N4P3	179 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	MGLL	Q99685	303 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	OR51E2	Q9H255	320 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	OSGEPL1	Q9H4B0	414 aa		13.55	□□□□□ -0.24
GGA1-218	ENST00000475445	ANTXRL	A6NF34	631 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	DSCR3	O14972	297 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	UGT2B17	O75795	530 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	SERPIND1	P05546	499 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	NR2F1	P10589	423 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	HTR2B	P41595	481 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	XK	P51811	444 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	CRISP3	P54108	245 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	ABAT	P80404	500 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	SYPL1	Q16563	259 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	NDUFA9	Q16795	377 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	DUSP6	Q16828	381 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	ZFP69	Q49AA0	526 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	BHLHB9	Q6PI77	547 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	CORO6	Q6QEF8	472 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	AMER3	Q8N944	861 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	OR4D11	Q8NGI4	311 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	POLR2J3	Q9H1A7	115 aa	Known RBP	13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	MVB12B	Q9H7P6	319 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	C11orf16	Q9NQ32	467 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	POLE4	Q9NR33	117 aa		13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.54	□□□□□ -0.24
GGA1-218	ENST00000475445	TRANK1	O15050	2925 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms