RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 CA5BQ9Y2D0 317 aa5.74□□□□□ -1.49
SMARCE1-208ENST00000474246 POLQO75417 2590 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 ELOA3CA0A087WX78 387 aaPredicted RBP5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 ELOA3DA6NLF2 546 aaPredicted RBP5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 KIAA1324LA8MWY0 1029 aaPredicted RBP5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 ZNF487B1APH4 448 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 POC1B-GALNT4F8VUJ3 575 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 CHP2O43745 196 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 SHOX2O60902 331 aaPredicted RBP5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 ANGPTL1O95841 491 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 TRUB2O95900 331 aaKnown RBP5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 MT-ND1P03886 318 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 OR52Z1P0C646 297 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 COX7A2P14406 83 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 ZNF44P15621 663 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 KLRC1P26715 233 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 GTF2E2P29084 291 aaKnown RBP5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 PRDX6P30041 224 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 MAP3K8P41279 467 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 ARSFP54793 590 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 ATP5J2P56134 94 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 CNTN2Q02246 1040 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 ITGA9Q13797 1035 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 POU6F1Q14863 301 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 IRF4Q15306 451 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 BSXQ3C1V8 233 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 ACCSLQ4AC99 568 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 KHDC1Q4VXA5 237 aaKnown RBP5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 TNFAIP8L3Q5GJ75 292 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 SLC25A53Q5H9E4 307 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 LGSNQ5TDP6 509 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 CDKAL1Q5VV42 579 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 CYB5R2Q6BCY4 276 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 OR52E8Q6IFG1 317 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 ADNP2Q6IQ32 1131 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 C11orf63Q6NUN7 778 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 DLEU7Q6UYE1 221 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 USP30Q70CQ3 517 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 GDPD3Q7L5L3 318 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 PHF13Q86YI8 300 aaPredicted RBP5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 LILRA2Q8N149 483 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 CCDC71LQ8N9Z2 235 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 MFSD9Q8NBP5 474 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 FAM222BQ8WU58 562 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 NUDT8Q8WV74 236 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 HGDQ93099 445 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 TMBIM1Q969X1 311 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 EXOSC8Q96B26 276 aaKnown RBP5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 SPSB1Q96BD6 273 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 R3HDM4Q96D70 268 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 MISP3Q96FF7 219 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 PLPPR2Q96GM1 343 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 CLPTM1LQ96KA5 538 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 FAM210BQ96KR6 192 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 LRR1Q96L50 414 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 SERPINB12Q96P63 405 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 TGS1Q96RS0 853 aaKnown RBP5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 SOX7Q9BT81 388 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 KATNB1Q9BVA0 655 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 FSD1LQ9BXM9 530 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 NMUR2Q9GZQ4 415 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 PCBD2Q9H0N5 130 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 TMEM231Q9H6L2 316 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 HHATLQ9HCP6 504 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 LYRM4Q9HD34 91 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 FBXO8Q9NRD0 319 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 SLC2A8Q9NY64 477 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 ARPP21Q9UBL0 812 aaPredicted RBP5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 GUCA1BQ9UMX6 200 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 ASB4Q9Y574 426 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 KLK4Q9Y5K2 254 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 SLCO1B1Q9Y6L6 691 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 FRYQ5TBA9 3013 aa5.73□□□□□ -1.49
SMARCE1-208ENST00000474246 A0A1W2PRG6 482 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 NEDD8-MDP1E9PL57 170 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 MKRN2OSH3BPM6 223 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 CCRL2O00421 344 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 CFLARO15519 480 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 FLRT2O43155 660 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 HEXAP06865 529 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 FGF5P12034 268 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 PAICSP22234 425 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 ITGA3P26006 1051 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 MARCKSP29966 332 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 SHMT2P34897 504 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 CEACAM3P40198 252 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 SRP9P49458 86 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 NDST1P52848 882 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 SLC37A1P57057 533 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 STX4Q12846 297 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 ILKQ13418 452 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 TUSC3Q13454 348 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 GRM4Q14833 912 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 DUSP7Q16829 419 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 DPCR1Q3MIW9 517 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 PRRT3Q5FWE3 981 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 EFCAB12Q6NXP0 572 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 FAM199XQ6PEV8 388 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 MPZL3Q6UWV2 235 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms