RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 SOX17Q9H6I2 414 aaPredicted RBP12.38□□□□□ -0.43
BRAT1-205ENST00000473879 CXorf36Q9H7Y0 433 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 TPT1P8Q9HAU6 139 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 C3orf14Q9HBI5 128 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 LANCL2Q9NS86 450 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 SLC6A13Q9NSD5 602 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 CMTM6Q9NX76 183 aa12.38□□□□□ -0.43
BRAT1-205ENST00000473879 SUCOQ9UBS9 1254 aaKnown RBP12.38□□□□□ -0.43
BRAT1-205ENST00000473879 SOCS6O14544 535 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 PDE5AO76074 875 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 STAMBPO95630 424 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 PDGFAP04085 211 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 CYC1P08574 325 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 ZGLP1P0C6A0 271 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 HSD17B1P14061 328 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 CASRP41180 1078 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 MAGEA8P43361 318 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 PGDP52209 483 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 SOX8P57073 446 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 LIPEQ05469 1076 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 BNIP2Q12982 314 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 FADDQ13158 208 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 ZNF750Q32MQ0 723 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 MINDY4Q4G0A6 757 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 PGM2L1Q6PCE3 622 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 ANGPTL8Q6UXH0 198 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 OR4N5Q8IXE1 308 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 ST13P4Q8IZP2 240 aaPredicted RBP12.37□□□□□ -0.43
BRAT1-205ENST00000473879 CLEC1AQ8NC01 280 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 FDCSPQ8NFU4 85 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 OR56A1Q8NGH5 318 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 OR9A2Q8NGT5 310 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 ZNF675Q8TD23 568 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 FAM120BQ96EK7 910 aaKnown RBP12.37□□□□□ -0.43
BRAT1-205ENST00000473879 AURKBQ96GD4 344 aaPredicted RBP12.37□□□□□ -0.43
BRAT1-205ENST00000473879 CLPTM1LQ96KA5 538 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 DGAT2Q96PD7 388 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 KCTD14Q9BQ13 255 aaPredicted RBP12.37□□□□□ -0.43
BRAT1-205ENST00000473879 MUC13Q9H3R2 512 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 ALG2Q9H553 416 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 SIRT3Q9NTG7 399 aaPredicted RBP12.37□□□□□ -0.43
BRAT1-205ENST00000473879 PTGFRNQ9P2B2 879 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 BCAP29Q9UHQ4 241 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 ZNF451Q9Y4E5 1061 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 TENM4Q6N022 2769 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 SPTA1P02549 2419 aa12.37□□□□□ -0.43
BRAT1-205ENST00000473879 MED13Q9UHV7 2174 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 FAM220BPB1ANY3 271 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 PLOD2O00469 737 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 EMC8O43402 210 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 GPX2P18283 190 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 NT5EP21589 574 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 GALNSP34059 522 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 STT3AP46977 705 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 CCT3P49368 545 aaKnown RBP12.36□□□□□ -0.43
BRAT1-205ENST00000473879 ANXA11P50995 505 aaKnown RBP12.36□□□□□ -0.43
BRAT1-205ENST00000473879 TXNL4AP83876 142 aaKnown RBP12.36□□□□□ -0.43
BRAT1-205ENST00000473879 ID2Q02363 134 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 DUSP2Q05923 314 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 CEACAM7Q14002 265 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 SELPLGQ14242 412 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 VWA2Q5GFL6 755 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 SAXO2Q658L1 398 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 TMEM107Q6UX40 140 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 SHISA6Q6ZSJ9 500 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 SZRD1Q7Z422 152 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 NET1Q7Z628 596 aaPredicted RBP12.36□□□□□ -0.43
BRAT1-205ENST00000473879 HPS6Q86YV9 775 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 TEX19Q8NA77 164 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 OR52N2Q8NGI0 321 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 OR5AK3PQ8NH89 298 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 CCDC124Q96CT7 223 aaKnown RBP12.36□□□□□ -0.43
BRAT1-205ENST00000473879 ASB9Q96DX5 294 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 NEURL3Q96EH8 262 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 VPS50Q96JG6 964 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 PTCHD1Q96NR3 888 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 SMAD5Q99717 465 aaKnown RBP12.36□□□□□ -0.43
BRAT1-205ENST00000473879 CRB3Q9BUF7 120 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 NUDT9Q9BW91 350 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 ALOXE3Q9BYJ1 711 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 KAT8Q9H7Z6 458 aaKnown RBP12.36□□□□□ -0.43
BRAT1-205ENST00000473879 ATP13A2Q9NQ11 1180 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 ZCCHC3Q9NUD5 404 aaKnown RBP12.36□□□□□ -0.43
BRAT1-205ENST00000473879 DDX18Q9NVP1 670 aaKnown RBP12.36□□□□□ -0.43
BRAT1-205ENST00000473879 GPR83Q9NYM4 423 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 CD300AQ9UGN4 299 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 SLC7A8Q9UHI5 535 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 ERVK-11Q9UQG0 969 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 HS3ST3B1Q9Y662 390 aa12.36□□□□□ -0.43
BRAT1-205ENST00000473879 SETXQ7Z333 2677 aaKnown RBP12.35□□□□□ -0.43
BRAT1-205ENST00000473879 A0A087WV62 115 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 A0A1W2PS29 197 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 PRORSD1PA6NEY8 169 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 A6NL46 340 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 DYRK3O43781 588 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 JRKO75564 520 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 TCN1P20061 433 aaPredicted RBP12.35□□□□□ -0.43
BRAT1-205ENST00000473879 MAOAP21397 527 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 HTR1EP28566 365 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 MC3RP41968 323 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms