RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 CPOXP36551 454 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 EIF2S3P41091 472 aaKnown RBP11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 PRIM2P49643 509 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 KHKP50053 298 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 EMDP50402 254 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 CLCN2P51788 898 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 CASP9P55211 416 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 SLC37A1P57057 533 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 PSME3P61289 254 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 SELPLGQ14242 412 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 CRTC2Q53ET0 693 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 NANOGP8Q6NSW7 305 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 MFSD12Q6NUT3 480 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 C8orf82Q6P1X6 216 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 C16orf89Q6UX73 402 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 ARPINQ7Z6K5 226 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 RNF130Q86XS8 419 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 SPACA3Q8IXA5 215 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 C9orf40Q8IXQ3 194 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 PGAM4Q8N0Y7 254 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 KIF2BQ8N4N8 673 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 APCDD1LQ8NCL9 501 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 OR8J3Q8NGG0 315 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 C16orf52Q8NHV5 167 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 FBXO30Q8TB52 745 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 JADE3Q92613 823 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 C16orf58Q96GQ5 468 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 HOPXQ9BPY8 73 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 GPATCH1Q9BRR8 931 aaKnown RBP11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 YIPF4Q9BSR8 244 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 ITPAQ9BY32 194 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 RAD21L1Q9H4I0 556 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 SERHL2Q9H4I8 314 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 IKZF5Q9H5V7 419 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 NANOGQ9H9S0 305 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 FOLH1BQ9HBA9 442 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 PRODH2Q9UF12 536 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 FAF1Q9UNN5 650 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 CFL2Q9Y281 166 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 DTX4Q9Y2E6 619 aa11.66□□□□□ -0.54
TRAPPC12-217ENST00000473348 NINQ8N4C6 2090 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 OR6C76A6NM76 312 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 EVPLLA8MZ36 301 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 EFSO43281 561 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 ACP2P11117 423 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 SLC7A2P52569 658 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 VAC14Q08AM6 782 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 FADDQ13158 208 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 EBPQ15125 230 aaKnown RBP11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 ZSCAN26Q16670 478 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 RABL3Q5HYI8 236 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 COX20Q5RI15 118 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 HSDL2Q6YN16 418 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 SLC29A4Q7RTT9 530 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 GPR155Q7Z3F1 870 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 WDR53Q7Z5U6 358 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 DEFB107AQ8IZN7 70 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 CDRT4Q8N9R6 151 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 ZSCAN1Q8NBB4 408 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 OR52N2Q8NGI0 321 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 M1APQ8TC57 530 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 ELP5Q8TE02 316 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 THAP4Q8WY91 577 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 ZCCHC14Q8WYQ9 949 aaKnown RBP11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 TMEM125Q96AQ2 219 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 SLC7A6OSQ96CW6 309 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 OTUB1Q96FW1 271 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 VSTM2LQ96N03 204 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 GAL3ST4Q96RP7 486 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 SH3GL1Q99961 368 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 THUMPD3Q9BV44 507 aaKnown RBP11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 ACTRT3Q9BYD9 372 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 MMP25Q9NPA2 562 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 CORO2BQ9UQ03 480 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 POLHQ9Y253 713 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 RAXQ9Y2V3 346 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 GMEB1Q9Y692 573 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 FREM2Q5SZK8 3169 aa11.65□□□□□ -0.54
TRAPPC12-217ENST00000473348 TNRC6AQ8NDV7 1962 aaKnown RBP11.65□□□□□ -0.55
TRAPPC12-217ENST00000473348 PTPRQQ9UMZ3 2332 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 ARGFXA6NJG6 315 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 NME4O00746 187 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 ICAM2P13598 275 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 ETFAP13804 333 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 MATN1P21941 496 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 CRATP43155 626 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 MVDP53602 400 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 RRADP55042 308 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 NCALDP61601 193 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 RNF4P78317 190 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 TLE3Q04726 772 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 Q0VFX4 171 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 MYBPC3Q14896 1274 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 ZNHIT3Q15649 155 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 NNATQ16517 81 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 DCAF10Q5QP82 559 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 BROXQ5VW32 411 aa11.64□□□□□ -0.55
TRAPPC12-217ENST00000473348 HLA-DQA1Q5Y7H0 255 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms