RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 NBEAQ8NFP9 2946 aa16.38■□□□□ 0.21
HSPG2-208ENST00000471322 BLACEA4D250 179 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 TAF4O00268 1085 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 ZBTB11O95625 1053 aaPredicted RBP16.37■□□□□ 0.21
HSPG2-208ENST00000471322 MLLT3P42568 568 aaPredicted RBP16.37■□□□□ 0.21
HSPG2-208ENST00000471322 GTF2A1P52655 376 aaPredicted RBP16.37■□□□□ 0.21
HSPG2-208ENST00000471322 RAB38P57729 211 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 RPS26P62854 115 aaKnown RBP16.37■□□□□ 0.21
HSPG2-208ENST00000471322 MERTKQ12866 999 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 EPS8Q12929 822 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 FAM53BQ14153 422 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 ZNF750Q32MQ0 723 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 OTUD3Q5T2D3 398 aaPredicted RBP16.37■□□□□ 0.21
HSPG2-208ENST00000471322 SHQ1Q6PI26 577 aaKnown RBP16.37■□□□□ 0.21
HSPG2-208ENST00000471322 SZRD1Q7Z422 152 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 GALNT10Q86SR1 603 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 ARHGEF39Q8N4T4 335 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 ADAMTS18Q8TE60 1221 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 RASSF5Q8WWW0 418 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 TAMM41Q96BW9 452 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 CNBD2Q96M20 576 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 ZNF347Q96SE7 839 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 ANKRD60Q9BZ19 345 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 OR51I1Q9H343 314 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 APMAPQ9HDC9 416 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 USE1Q9NZ43 259 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 NTMQ9P121 344 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 TRPC4Q9UBN4 977 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 RAXQ9Y2V3 346 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 URB1O60287 2271 aaKnown RBP16.37■□□□□ 0.21
HSPG2-208ENST00000471322 PLOD2O00469 737 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 CYR61O00622 381 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 ASNA1O43681 348 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 TLX3O43711 291 aaPredicted RBP16.37■□□□□ 0.21
HSPG2-208ENST00000471322 BMP10O95393 424 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 PGM3O95394 542 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 IFI6P09912 130 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 UBTFL6P0CB48 400 aaPredicted RBP16.37■□□□□ 0.21
HSPG2-208ENST00000471322 PORP16435 677 aaPredicted RBP16.37■□□□□ 0.21
HSPG2-208ENST00000471322 DNAJA1P31689 397 aaKnown RBP16.37■□□□□ 0.21
HSPG2-208ENST00000471322 DCTP40126 519 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 EMP3P54852 163 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 UGT2A3Q6UWM9 527 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 TMEM107Q6UX40 140 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 CHERPQ8IWX8 916 aaKnown RBP16.37■□□□□ 0.21
HSPG2-208ENST00000471322 CA13Q8N1Q1 262 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 DHRSXQ8N5I4 330 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 TTC29Q8NA56 475 aaPredicted RBP16.37■□□□□ 0.21
HSPG2-208ENST00000471322 OR9A2Q8NGT5 310 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 SPPL2AQ8TCT8 520 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 GEMIN6Q8WXD5 167 aaKnown RBP16.37■□□□□ 0.21
HSPG2-208ENST00000471322 TMEM19Q96HH6 336 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 C7orf34Q96L11 122 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 ADI1Q9BV57 179 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 ZNF768Q9H5H4 540 aaKnown RBP16.37■□□□□ 0.21
HSPG2-208ENST00000471322 SOHLH2Q9NX45 425 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 SLC39A1Q9NY26 324 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 FOXJ2Q9P0K8 574 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 PTGFRNQ9P2B2 879 aa16.37■□□□□ 0.21
HSPG2-208ENST00000471322 ZNF860A6NHJ4 632 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 C9orf172C9J069 976 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 H0YAE9 185 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 DLGAP1O14490 977 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 SLC28A2O43868 658 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 SERPINB7O75635 380 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 GPR75O95800 540 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 AGR2O95994 175 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 ALPLP05186 524 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 BCHEP06276 602 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 CPMP14384 443 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 SLC5A2P31639 672 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 PRKAG1P54619 331 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 ITGA1P56199 1179 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 SNRPNP63162 240 aaKnown RBP16.36■□□□□ 0.21
HSPG2-208ENST00000471322 VLDLRP98155 873 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 DUSP2Q05923 314 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 COL9A2Q14055 689 aaPredicted RBP16.36■□□□□ 0.21
HSPG2-208ENST00000471322 DEFB110Q30KQ9 67 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 TBC1D25Q3MII6 688 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 PRAMEF8Q5VWM4 474 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 PRAMEF7Q5VXH5 474 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 TMEM154Q6P9G4 183 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 TBPL2Q6SJ96 375 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 PRSS42Q7Z5A4 293 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 CARM1Q86X55 608 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 KRT73Q86Y46 540 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 NUP43Q8NFH3 380 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 XAGE5Q8WWM1 108 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 N4BP2L2Q92802 583 aaPredicted RBP16.36■□□□□ 0.21
HSPG2-208ENST00000471322 MAGED4Q96JG8 741 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 DCBLD2Q96PD2 775 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 CSF3RQ99062 836 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 SPATA5L1Q9BVQ7 753 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 REEP1Q9H902 201 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 THSD1Q9NS62 852 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 STARD5Q9NSY2 213 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 B3GALT1Q9Y5Z6 326 aa16.36■□□□□ 0.21
HSPG2-208ENST00000471322 MGAQ8IWI9 3026 aa16.35■□□□□ 0.21
HSPG2-208ENST00000471322 DUXAA6NLW8 204 aa16.35■□□□□ 0.21
HSPG2-208ENST00000471322 TMEM229AB2RXF0 380 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms