RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 SEPHS1P49903 392 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 ZNF425Q6IV72 752 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 TMEM64Q6YI46 380 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 RD3Q7Z3Z2 195 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 C11orf74Q86VG3 221 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 VRK2Q86Y07 508 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 LYSMD2Q8IV50 215 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 SHISA5Q8N114 240 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 SIMC1Q8NDZ2 872 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 TRMT61AQ96FX7 289 aaKnown RBP13.81□□□□□ -0.2
CBWD3-205ENST00000469687 OR7D2Q96RA2 312 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 ZSCAN32Q9NX65 697 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 CCDC59Q9P031 241 aaKnown RBP13.81□□□□□ -0.2
CBWD3-205ENST00000469687 ENTPD4Q9Y227 616 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 CAB39Q9Y376 341 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-205ENST00000469687 CHST2Q9Y4C5 530 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 PRUNE2Q8WUY3 3088 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 PRSS38A1L453 326 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 PROM1O43490 865 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 SLITRK5O94991 958 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 APOL3O95236 402 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 ZIC2O95409 532 aaPredicted RBP13.8□□□□□ -0.2
CBWD3-205ENST00000469687 HBQ1P09105 142 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 BTN3A2P78410 334 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 HOXC5Q00444 222 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 CHRNEQ04844 493 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 MFSD4BQ5TF39 518 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 STEAP3Q658P3 488 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 VN1R4Q7Z5H5 301 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 KIF18BQ86Y91 864 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 PARP16Q8N5Y8 322 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 OR8J1Q8NGP2 316 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 KLHL6Q8WZ60 621 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 TMEM80Q96HE8 168 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 PRRC1Q96M27 445 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 SLC38A1Q9H2H9 487 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 EGLN3Q9H6Z9 239 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 RMI1Q9H9A7 625 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 NTNG1Q9Y2I2 539 aa13.8□□□□□ -0.2
CBWD3-205ENST00000469687 CACNB4O00305 520 aaPredicted RBP13.79□□□□□ -0.2
CBWD3-205ENST00000469687 FHP07954 510 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 CHRM5P08912 532 aaPredicted RBP13.79□□□□□ -0.2
CBWD3-205ENST00000469687 MAGP20916 626 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 CSTF2P33240 577 aaKnown RBP eCLIP13.79□□□□□ -0.2
CBWD3-205ENST00000469687 SMIM11AP58511 58 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 ABATP80404 500 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 GINS1Q14691 196 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 TJAP1Q5JTD0 557 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 FAM92BQ6ZTR7 304 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 TRIM73Q86UV7 250 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 EGFL6Q8IUX8 553 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 MFSD9Q8NBP5 474 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 NUP43Q8NFH3 380 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 SFXN5Q8TD22 340 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 ELP4Q96EB1 424 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 ZNF681Q96N22 645 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 DNAJB6O75190 326 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 SCG5P05408 212 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 CSNK2A2P19784 350 aaPredicted RBP13.79□□□□□ -0.2
CBWD3-205ENST00000469687 CMPK1P30085 196 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 SPHARQ15513 63 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 SYT14P1Q58G82 188 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 TMEM31Q5JXX7 168 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 FAM111BQ6SJ93 734 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 NUDT18Q6ZVK8 323 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 AMIGO1Q86WK6 493 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 LCN9Q8WX39 176 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 OR1E3Q8WZA6 343 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 HTRA1Q92743 480 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 KCNS3Q9BQ31 491 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 CNPPD1Q9BV87 410 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 SARGQ9BW04 601 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 EXOSC4Q9NPD3 245 aaKnown RBP13.79□□□□□ -0.2
CBWD3-205ENST00000469687 TMEM74BQ9NUR3 256 aa13.79□□□□□ -0.2
CBWD3-205ENST00000469687 ZNF624Q9P2J8 865 aaPredicted RBP13.79□□□□□ -0.2
CBWD3-205ENST00000469687 TRIOO75962 3097 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 A0A087WUU8 490 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 A0A1W2PQF6 199 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 CPSF4LA6NMK7 179 aaKnown RBP13.78□□□□□ -0.2
CBWD3-205ENST00000469687 FCMRO60667 390 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 LAMP2P13473 410 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 TRHRP34981 398 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-205ENST00000469687 GIPRP48546 466 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 PCYT1AP49585 367 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 LBX1P52954 281 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 RHAGQ02094 409 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 MLLT1Q03111 559 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-205ENST00000469687 MAP4K2Q12851 820 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 ZNF311Q5JNZ3 666 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 C1orf94Q6P1W5 598 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 ENPP7Q6UWV6 458 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 DOK4Q8TEW6 326 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 TSACCQ96A04 125 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-205ENST00000469687 ELSPBP1Q96BH3 223 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 GIMAP5Q96F15 307 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 LRR1Q96L50 414 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 OR2M4Q96R27 311 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 KIR3DX1Q9H7L2 352 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 SEMA4GQ9NTN9 838 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms