RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 CFAP157Q5JU67 520 aa17.51■□□□□ 0.39
COL7A1-207ENST00000467985 FAM111BQ6SJ93 734 aa17.51■□□□□ 0.39
COL7A1-207ENST00000467985 CROCCP2Q86T23 111 aa17.51■□□□□ 0.39
COL7A1-207ENST00000467985 SRRM1Q8IYB3 904 aaKnown RBP17.51■□□□□ 0.39
COL7A1-207ENST00000467985 LIX1Q8N485 282 aa17.51■□□□□ 0.39
COL7A1-207ENST00000467985 ZNF675Q8TD23 568 aa17.51■□□□□ 0.39
COL7A1-207ENST00000467985 LCORQ96JN0 433 aaPredicted RBP17.51■□□□□ 0.39
COL7A1-207ENST00000467985 ROPN1BQ9BZX4 212 aaPredicted RBP17.51■□□□□ 0.39
COL7A1-207ENST00000467985 NXF5Q9H1B4 397 aaKnown RBP17.51■□□□□ 0.39
COL7A1-207ENST00000467985 ROPN1Q9HAT0 212 aaPredicted RBP17.51■□□□□ 0.39
COL7A1-207ENST00000467985 PFDN4Q9NQP4 134 aa17.51■□□□□ 0.39
COL7A1-207ENST00000467985 EHD3Q9NZN3 535 aa17.51■□□□□ 0.39
COL7A1-207ENST00000467985 HEY2Q9UBP5 337 aa17.51■□□□□ 0.39
COL7A1-207ENST00000467985 TIMM22Q9Y584 194 aa17.51■□□□□ 0.39
COL7A1-207ENST00000467985 CSMD2Q7Z408 3487 aa17.51■□□□□ 0.39
COL7A1-207ENST00000467985 PLIN3O60664 434 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 PPM1BO75688 479 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 LRATO95237 230 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 ABCB1P08183 1280 aaPredicted RBP17.5■□□□□ 0.39
COL7A1-207ENST00000467985 GABRA1P14867 456 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 GDF1P27539 372 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 SSTR2P30874 369 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 CASP3P42574 277 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 KIR3DL1P43629 444 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 NAGLUP54802 743 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 NUP107P57740 925 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 PSPHP78330 225 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 RAE1P78406 368 aaKnown RBP17.5■□□□□ 0.39
COL7A1-207ENST00000467985 HMGCS1Q01581 520 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 EXOSC7Q15024 291 aaKnown RBP17.5■□□□□ 0.39
COL7A1-207ENST00000467985 CEP85LQ5SZL2 805 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 LRIG3Q6UXM1 1119 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 FRMD7Q6ZUT3 714 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 NUP54Q7Z3B4 507 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 RIBC1Q8N443 379 aaPredicted RBP17.5■□□□□ 0.39
COL7A1-207ENST00000467985 ADCY4Q8NFM4 1077 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 NEIL3Q8TAT5 605 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 C16orf78Q8WTQ4 265 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 C11orf24Q96F05 449 aaPredicted RBP17.5■□□□□ 0.39
COL7A1-207ENST00000467985 APIPQ96GX9 242 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 ZIM3Q96PE6 472 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 KCNA7Q96RP8 456 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 TTYH2Q9BSA4 534 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 TRIM8Q9BZR9 551 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 ENKD1Q9H0I2 346 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 CENPHQ9H3R5 247 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 KCNJ16Q9NPI9 418 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 DTX4Q9Y2E6 619 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 NINQ8N4C6 2090 aa17.5■□□□□ 0.39
COL7A1-207ENST00000467985 POLQO75417 2590 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 UBFD1O14562 309 aaKnown RBP17.49■□□□□ 0.39
COL7A1-207ENST00000467985 COPEO14579 308 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 CRCPO75575 148 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 CBX7O95931 251 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 ANXA4P09525 319 aaPredicted RBP17.49■□□□□ 0.39
COL7A1-207ENST00000467985 DRD5P21918 477 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 PPICP45877 212 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 MASP1P48740 699 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 SNTA1Q13424 505 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 TRMT12Q53H54 448 aaKnown RBP17.49■□□□□ 0.39
COL7A1-207ENST00000467985 SPDYAQ5MJ70 313 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 TMEM81Q6P7N7 255 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 PRR22Q8IZ63 422 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 RPRMLQ8N4K4 120 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 CCDC63Q8NA47 563 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 ACBD4Q8NC06 268 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 OR52R1Q8NGF1 315 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 FAM76AQ8TAV0 307 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 ITPAQ9BY32 194 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 METTL7AQ9H8H3 244 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 OXSMQ9NWU1 459 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 MID2Q9UJV3 735 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 WBP11Q9Y2W2 641 aaKnown RBP17.49■□□□□ 0.39
COL7A1-207ENST00000467985 PLLPQ9Y342 182 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 FAM215AQ9Y5M1 114 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 EXPH5Q8NEV8 1989 aa17.49■□□□□ 0.39
COL7A1-207ENST00000467985 GLI4P10075 376 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 CPA3P15088 417 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 PCSK2P16519 638 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 KRT4P19013 534 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 ENDOUP21128 410 aaKnown RBP17.48■□□□□ 0.39
COL7A1-207ENST00000467985 ELAVL4P26378 380 aaKnown RBP17.48■□□□□ 0.39
COL7A1-207ENST00000467985 MPIP34949 423 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 EMDP50402 254 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 DUSP2Q05923 314 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 ZNF844Q08AG5 666 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 ZNF763Q0D2J5 394 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 PLCXD2Q0VAA5 305 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 DUSP8Q13202 625 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 LTB4RQ15722 352 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 IMPG1Q17R60 797 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 ZNF628Q5EBL2 1059 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 C1orf185Q5T7R7 199 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 FAM219BQ5XKK7 198 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 BICRALQ6AI39 1079 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 TRIM46Q7Z4K8 759 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 CCDC116Q8IYX3 515 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 OR10Q1Q8NGQ4 319 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 EXOSC8Q96B26 276 aaKnown RBP17.48■□□□□ 0.39
COL7A1-207ENST00000467985 OMA1Q96E52 524 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms