RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 PRKCIP41743 596 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 TNNT3P45378 269 aaPredicted RBP3.8□□□□□ -1.8
SSR3-204ENST00000467733 HSPA7P48741 367 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 CYB561P49447 251 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 AGTR2P50052 363 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 XIAPP98170 497 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 SORDQ00796 357 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 RUNX1T1Q06455 604 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 CSHL1Q14406 222 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 PIGHQ14442 188 aaPredicted RBP3.8□□□□□ -1.8
SSR3-204ENST00000467733 PTPRCAPQ14761 206 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 SLC1A5Q15758 541 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 KRTAP24-1Q3LI83 254 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 HSP90AA4PQ58FG1 418 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 AWAT1Q58HT5 328 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 TCP11X2Q5H9J9 407 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 C1orf185Q5T7R7 199 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 GARNL3Q5VVW2 1013 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 HEPHL1Q6MZM0 1159 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 PAPD4Q6PIY7 484 aaKnown RBP3.8□□□□□ -1.8
SSR3-204ENST00000467733 SLC13A5Q86YT5 568 aaPredicted RBP3.8□□□□□ -1.8
SSR3-204ENST00000467733 DCUN1D3Q8IWE4 304 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 OR4N4Q8N0Y3 316 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 SLC25A41Q8N5S1 370 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 PQLC3Q8N755 202 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 LMNTD1Q8N9Z9 388 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 MLKLQ8NB16 471 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 OR5M9Q8NGP3 310 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 OR2L8Q8NGY9 312 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 SVIPQ8NHG7 77 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 SMPDL3BQ92485 455 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 SLCO2A1Q92959 643 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 PIGTQ969N2 578 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 MUL1Q969V5 352 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 SMC6Q96SB8 1091 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 RAB11FIP5Q9BXF6 653 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 DRC3Q9H069 523 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 NUAK2Q9H093 628 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 ZDHHC11Q9H8X9 412 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 SAP30LQ9HAJ7 183 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 MRPL47Q9HD33 250 aaKnown RBP3.8□□□□□ -1.8
SSR3-204ENST00000467733 TAB2Q9NYJ8 693 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 STOX2Q9P2F5 926 aaPredicted RBP3.8□□□□□ -1.8
SSR3-204ENST00000467733 KLHL13Q9P2N7 655 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 MTRF1LQ9UGC7 380 aaKnown RBP3.8□□□□□ -1.8
SSR3-204ENST00000467733 FAM153AQ9UHL3 310 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 ARL5AQ9Y689 179 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 MED12LQ86YW9 2145 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 YLPM1P49750 1951 aaKnown RBP3.8□□□□□ -1.8
SSR3-204ENST00000467733 MALRD1Q5VYJ5 2156 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 TRBV5-4A0A0C4DH59 114 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 A0A0J9YVX5 310 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 SLC5A10A0PJK1 596 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 OR2A25A4D2G3 310 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 C2orf81A6NN90 581 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 HSPB2A8KAH6 182 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 ARHGEF33A8MVX0 844 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 H0YGG7 62 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 NDC80O14777 642 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 SPRY1O43609 319 aaPredicted RBP3.79□□□□□ -1.8
SSR3-204ENST00000467733 DNAJB6O75190 326 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 PDE9AO76083 593 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 AP2A2O94973 939 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 IGHG3P01860 377 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 RPN2P04844 631 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 CCDC172P0C7W6 258 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 GZMAP12544 262 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 CD9P21926 228 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 MT3P25713 68 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 PTPN3P26045 913 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 PSMB5P28074 263 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 GJC1P36383 396 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 HLCSP50747 726 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 ZNF140P52738 457 aaPredicted RBP3.79□□□□□ -1.8
SSR3-204ENST00000467733 MLF1P58340 268 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 ARF3P61204 181 aaPredicted RBP3.79□□□□□ -1.8
SSR3-204ENST00000467733 RAE1P78406 368 aaKnown RBP3.79□□□□□ -1.8
SSR3-204ENST00000467733 MAT1AQ00266 395 aaKnown RBP3.79□□□□□ -1.8
SSR3-204ENST00000467733 PLOD1Q02809 727 aaPredicted RBP3.79□□□□□ -1.8
SSR3-204ENST00000467733 PTK6Q13882 451 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 MESDQ14696 234 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 KPNB1Q14974 876 aaKnown RBP3.79□□□□□ -1.8
SSR3-204ENST00000467733 NAA25Q14CX7 972 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 BRD3Q15059 726 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 PDK1Q15118 436 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 PDK2Q15119 407 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 RBMS2Q15434 407 aaKnown RBP3.79□□□□□ -1.8
SSR3-204ENST00000467733 TAF1AQ15573 450 aaPredicted RBP3.79□□□□□ -1.8
SSR3-204ENST00000467733 HSPB2Q16082 182 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 SYT16Q17RD7 645 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 MPEG1Q2M385 716 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 GPR33Q49SQ1 333 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 GXYLT1Q4G148 440 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 FILIP1LQ4L180 1135 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 SYTL3Q4VX76 610 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 GLE1Q53GS7 698 aaKnown RBP3.79□□□□□ -1.8
SSR3-204ENST00000467733 SFT2D3Q587I9 215 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 DNAJC21Q5F1R6 531 aaKnown RBP3.79□□□□□ -1.8
SSR3-204ENST00000467733 FAM182AQ5T1J6 154 aa3.79□□□□□ -1.8
SSR3-204ENST00000467733 MFSD4BQ5TF39 518 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms