RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 RFWD2Q8NHY2 731 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 BHLHE41Q9C0J9 482 aaPredicted RBP12.85□□□□□ -0.35
UBA3-209ENST00000466763 C3orf14Q9HBI5 128 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 EQTNQ9NQ60 294 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 ACSS1Q9NUB1 689 aaPredicted RBP12.85□□□□□ -0.35
UBA3-209ENST00000466763 TAS2R9Q9NYW1 312 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 DTX4Q9Y2E6 619 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 SNX8Q9Y5X2 465 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 GPR45Q9Y5Y3 372 aa12.85□□□□□ -0.35
UBA3-209ENST00000466763 A0A0G2JND7 137 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 UPK1AO00322 258 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 SLC28A2O43868 658 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 ZNF354AO60765 605 aaPredicted RBP12.84□□□□□ -0.35
UBA3-209ENST00000466763 SLC25A12O75746 678 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 SLC22A3O75751 556 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 SLITRK5O94991 958 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 TRHRP34981 398 aaPredicted RBP12.84□□□□□ -0.35
UBA3-209ENST00000466763 SOAT1P35610 550 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 KIR3DL1P43629 444 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 EMDP50402 254 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 MLLT10P55197 1068 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 FAM174BQ3ZCQ3 159 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 SPANXN4Q5MJ08 99 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 SLC25A25Q6KCM7 469 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 ANKRD46Q86W74 232 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 ARMC10Q8N2F6 343 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 MIER2Q8N344 545 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 CISD2Q8N5K1 135 aaKnown RBP12.84□□□□□ -0.35
UBA3-209ENST00000466763 Q8NA96 180 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 FAM13CQ8NE31 585 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 VPS37AQ8NEZ2 397 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 NUP43Q8NFH3 380 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 OR5M3Q8NGP4 307 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 OR5P2Q8WZ92 322 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 ADIPOR1Q96A54 375 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 TP53INP1Q96A56 240 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 ERP27Q96DN0 273 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 LCORQ96JN0 433 aaPredicted RBP12.84□□□□□ -0.35
UBA3-209ENST00000466763 TEX37Q96LM6 180 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 CCDC28BQ9BUN5 200 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 HES7Q9BYE0 225 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 NXF5Q9H1B4 397 aaKnown RBP12.84□□□□□ -0.35
UBA3-209ENST00000466763 FOLH1BQ9HBA9 442 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 PCDHGB4Q9UN71 923 aa12.84□□□□□ -0.35
UBA3-209ENST00000466763 A0A087WV62 115 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 PLOD2O00469 737 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 ANKRD28O15084 1053 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 EMC8O43402 210 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 SUV39H1O43463 412 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 ERN1O75460 977 aaKnown RBP12.83□□□□□ -0.36
UBA3-209ENST00000466763 NEURL1O76050 574 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 NADKO95544 446 aaPredicted RBP12.83□□□□□ -0.36
UBA3-209ENST00000466763 SP1P08047 785 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 NCF2P19878 526 aaPredicted RBP12.83□□□□□ -0.36
UBA3-209ENST00000466763 FRKP42685 505 aaPredicted RBP12.83□□□□□ -0.36
UBA3-209ENST00000466763 PPICP45877 212 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 DGKQP52824 942 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 C21orf58P58505 322 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 DCAF7P61962 342 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 ZNHIT3Q15649 155 aaPredicted RBP12.83□□□□□ -0.36
UBA3-209ENST00000466763 PDCD4Q53EL6 469 aaKnown RBP12.83□□□□□ -0.36
UBA3-209ENST00000466763 FHL5Q5TD97 284 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 ANXA8L1Q5VT79 327 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 GALNTL5Q7Z4T8 443 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 WDR53Q7Z5U6 358 aaPredicted RBP12.83□□□□□ -0.36
UBA3-209ENST00000466763 GPALPP1Q8IXQ4 340 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 CLECL1Q8IZS7 167 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 SLC15A4Q8N697 577 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 TMEM178AQ8NBL3 297 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 MDS2Q8NDY4 140 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 OR4A15Q8NGL6 344 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 TESCQ96BS2 214 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 CHMP6Q96FZ7 201 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 CLMPQ9H6B4 373 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 TIMMDC1Q9NPL8 285 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 ZCCHC3Q9NUD5 404 aaKnown RBP12.83□□□□□ -0.36
UBA3-209ENST00000466763 C19orf53Q9UNZ5 99 aaPredicted RBP12.83□□□□□ -0.36
UBA3-209ENST00000466763 OR10H1Q9Y4A9 318 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 NPFFR2Q9Y5X5 522 aa12.83□□□□□ -0.36
UBA3-209ENST00000466763 EML6Q6ZMW3 1958 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 C2orf72A6NCS6 295 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 CAPN14A8MX76 684 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 CDK2AP1O14519 115 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 RASAL1O95294 804 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 IL12AP29459 219 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 KRT20P35900 424 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 CCT3P49368 545 aaKnown RBP12.82□□□□□ -0.36
UBA3-209ENST00000466763 GYS2P54840 703 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 CORO7P57737 925 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 PRR5P85299 388 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 PLCXD2Q0VAA5 305 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 MLC1Q15049 377 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 INPP5JQ15735 1006 aaPredicted RBP12.82□□□□□ -0.36
UBA3-209ENST00000466763 DPY19L1Q2PZI1 675 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 PRR30Q53SZ7 412 aaPredicted RBP12.82□□□□□ -0.36
UBA3-209ENST00000466763 PAOXQ6QHF9 649 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 RTL4Q6ZR62 310 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 MDGA2Q7Z553 956 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 CAMKMTQ7Z624 323 aa12.82□□□□□ -0.36
UBA3-209ENST00000466763 ZNF605Q86T29 641 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms