RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 SYCE3A1L190 88 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 URADA6NGE7 173 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 ZNF860A6NHJ4 632 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 CCL22O00626 93 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 TNFSF13O75888 250 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 SNX4O95219 450 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 VENTXO95231 258 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 ACSL3O95573 720 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 PLAUP00749 431 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 C1QAP02745 245 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 HPNP05981 417 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 DANCRP0C864 163 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 RNH1P13489 461 aaKnown RBP5.25□□□□□ -1.57
NCL-208ENST00000466274 CPN1P15169 458 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 PTPN6P29350 595 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 NR2C2P49116 596 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 CLK3P49761 638 aaKnown RBP5.25□□□□□ -1.57
NCL-208ENST00000466274 DUSP2Q05923 314 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 MSLNQ13421 630 aaPredicted RBP5.25□□□□□ -1.57
NCL-208ENST00000466274 RAB35Q15286 201 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 MPEG1Q2M385 716 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 AWAT1Q58HT5 328 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 TCP11X2Q5H9J9 407 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 CT47A1Q5JQC4 288 aaPredicted RBP5.25□□□□□ -1.57
NCL-208ENST00000466274 SLC9A4Q6AI14 798 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 ZNF474Q6S9Z5 364 aaPredicted RBP5.25□□□□□ -1.57
NCL-208ENST00000466274 RANBP10Q6VN20 620 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 ESPNLQ6ZVH7 1005 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 CHMP1BQ7LBR1 199 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 LDB1Q86U70 411 aaPredicted RBP5.25□□□□□ -1.57
NCL-208ENST00000466274 VSIG1Q86XK7 387 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 PDSS2Q86YH6 399 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 PLD3Q8IV08 490 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 PIANPQ8IYJ0 282 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 GCNT2Q8N0V5 402 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 SLC15A4Q8N697 577 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 PLD5Q8N7P1 536 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 SEMA6DQ8NFY4 1073 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 OR5T3Q8NGG3 340 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 STYXQ8WUJ0 223 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 MRPL24Q96A35 216 aaKnown RBP5.25□□□□□ -1.57
NCL-208ENST00000466274 MSI2Q96DH6 328 aaKnown RBP5.25□□□□□ -1.57
NCL-208ENST00000466274 STARD4Q96DR4 205 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 CDKN2AIPNLQ96HQ2 116 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 ZNF845Q96IR2 970 aaPredicted RBP5.25□□□□□ -1.57
NCL-208ENST00000466274 DNAJC1Q96KC8 554 aaKnown RBP5.25□□□□□ -1.57
NCL-208ENST00000466274 PRAP1Q96NZ9 151 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 OLFM3Q96PB7 478 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 PANX3Q96QZ0 392 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 NTMT1Q9BV86 223 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 UGT2B28Q9BY64 529 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 MANSC1Q9H8J5 431 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 NGBQ9NPG2 151 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 NECTIN3Q9NQS3 549 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 NLE1Q9NVX2 485 aaPredicted RBP5.25□□□□□ -1.57
NCL-208ENST00000466274 MED29Q9NX70 200 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 ZNF223Q9UK11 482 aaPredicted RBP5.25□□□□□ -1.57
NCL-208ENST00000466274 RNF115Q9Y4L5 304 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 PCDHGB1Q9Y5G3 927 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 WIF1Q9Y5W5 379 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 MPDZO75970 2070 aa5.25□□□□□ -1.57
NCL-208ENST00000466274 LRRC3CA6NJW4 275 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 C3orf70A6NLC5 250 aaPredicted RBP5.24□□□□□ -1.57
NCL-208ENST00000466274 RNASET2O00584 256 aaKnown RBP5.24□□□□□ -1.57
NCL-208ENST00000466274 CLOCKO15516 846 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 PRKNO60260 465 aaPredicted RBP5.24□□□□□ -1.57
NCL-208ENST00000466274 GALR3O60755 368 aaPredicted RBP5.24□□□□□ -1.57
NCL-208ENST00000466274 ALDOAP04075 364 aaKnown RBP5.24□□□□□ -1.57
NCL-208ENST00000466274 IFNA16P05015 189 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 ERGP11308 486 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 APEHP13798 732 aaKnown RBP5.24□□□□□ -1.57
NCL-208ENST00000466274 ALOX12P18054 663 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 KDELR1P24390 212 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 MSNP26038 577 aaKnown RBP5.24□□□□□ -1.57
NCL-208ENST00000466274 SERPINB3P29508 390 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 MASP1P48740 699 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 CCR8P51685 355 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 PNLIPRP1P54315 467 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 NHLH2Q02577 135 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 WASHC5Q12768 1159 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 C21orf62-AS1Q17RA5 79 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 ZNF791Q3KP31 576 aaPredicted RBP5.24□□□□□ -1.57
NCL-208ENST00000466274 ZNF672Q499Z4 452 aaPredicted RBP5.24□□□□□ -1.57
NCL-208ENST00000466274 DEFB134Q4QY38 66 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 HSP90AA4PQ58FG1 418 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 PIGGQ5H8A4 983 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 PRAMEF20Q5VT98 475 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 AGAP6Q5VW22 663 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 PTRHD1Q6GMV3 140 aaKnown RBP5.24□□□□□ -1.57
NCL-208ENST00000466274 ITPRIPL1Q6GPH6 555 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 CAPN13Q6MZZ7 669 aaPredicted RBP5.24□□□□□ -1.57
NCL-208ENST00000466274 CLEC17AQ6ZS10 378 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 MICALCLQ6ZW33 695 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 DOK3Q7L591 496 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 VN1R4Q7Z5H5 301 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 PEG10Q86TG7 708 aaKnown RBP5.24□□□□□ -1.57
NCL-208ENST00000466274 GPSM1Q86YR5 675 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 AFAP1L2Q8N4X5 818 aa5.24□□□□□ -1.57
NCL-208ENST00000466274 TBC1D19Q8N5T2 526 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms