RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 MFSD12Q6NUT3 480 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 RNF111Q6ZNA4 994 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 C6orf120Q7Z4R8 191 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 PROSER1Q86XN7 944 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 C10orf111Q8N326 155 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 KIF2BQ8N4N8 673 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 TRIML2Q8N7C3 387 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 ZNF441Q8N8Z8 693 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 NUP43Q8NFH3 380 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 M1APQ8TC57 530 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 MIPOL1Q8TD10 442 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 SLC7A6OSQ96CW6 309 aaPredicted RBP10.35□□□□□ -0.75
VCP-204ENST00000466100 VMP1Q96GC9 406 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 MAGED4Q96JG8 741 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 VSTM2LQ96N03 204 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 TPT1P8Q9HAU6 139 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 IL1RL2Q9HB29 575 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 FOLH1BQ9HBA9 442 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 C3orf14Q9HBI5 128 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 MMP25Q9NPA2 562 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 GID8Q9NWU2 228 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 RAXQ9Y2V3 346 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 HEMK1Q9Y5R4 338 aaPredicted RBP10.35□□□□□ -0.75
VCP-204ENST00000466100 SPENQ96T58 3664 aaKnown RBP10.35□□□□□ -0.75
VCP-204ENST00000466100 TLN1Q9Y490 2541 aaKnown RBP10.34□□□□□ -0.75
VCP-204ENST00000466100 A0A087WV48 116 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 TMEM200CA6NKL6 621 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 OR6C76A6NM76 312 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 CLIC1O00299 241 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 EBAG9O00559 213 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 PEX12O00623 359 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 ANP32DO95626 131 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 HMGN2P05204 90 aaKnown RBP10.34□□□□□ -0.75
VCP-204ENST00000466100 PRKAR1AP10644 381 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 ACP2P11117 423 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 MNAT1P51948 309 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 VAC14Q08AM6 782 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 LASP1Q14847 261 aaKnown RBP10.34□□□□□ -0.75
VCP-204ENST00000466100 BTBD16Q32M84 506 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 SPDYE7PQ495Y7 208 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 DCAF10Q5QP82 559 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 COX20Q5RI15 118 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 NANOGP8Q6NSW7 305 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 NPSR1Q6W5P4 371 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 RINLQ6ZS11 566 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 ARMC10Q8N2F6 343 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 RBM15BQ8NDT2 890 aaKnown RBP10.34□□□□□ -0.75
VCP-204ENST00000466100 OR8J3Q8NGG0 315 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 OR52N2Q8NGI0 321 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 OR8K3Q8NH51 312 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 THAP4Q8WY91 577 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 ADIPOR1Q96A54 375 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 TMEM125Q96AQ2 219 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 C16orf58Q96GQ5 468 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 VPS50Q96JG6 964 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 SLC35G5Q96KT7 338 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 BTBD9Q96Q07 612 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 LMF2Q9BU23 707 aaKnown RBP10.34□□□□□ -0.75
VCP-204ENST00000466100 TRIM8Q9BZR9 551 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 NANOGQ9H9S0 305 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.34□□□□□ -0.75
VCP-204ENST00000466100 ABCD2Q9UBJ2 740 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 COPS7AQ9UBW8 275 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 BCAP29Q9UHQ4 241 aa10.34□□□□□ -0.75
VCP-204ENST00000466100 EPG5Q9HCE0 2579 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 TRBV11-1A0A0K0K1C0 115 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 TMEM8BA6NDV4 472 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 B2RBV5 119 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 RRP8O43159 456 aaKnown RBP10.33□□□□□ -0.76
VCP-204ENST00000466100 NKX2-2O95096 273 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 KRT75O95678 551 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 SERPINA7P05543 415 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 KRT16P08779 473 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 CT45A8P0DMV1 189 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 CT45A9P0DMV2 189 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 ITGAMP11215 1152 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 BMP2P12643 396 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 GPX2P18283 190 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 PPIBP23284 216 aaKnown RBP10.33□□□□□ -0.76
VCP-204ENST00000466100 CHI3L1P36222 383 aaPredicted RBP10.33□□□□□ -0.76
VCP-204ENST00000466100 MAGEA8P43361 318 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 GZMMP51124 257 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 CLCN2P51788 898 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 MTPNP58546 118 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 PSME3P61289 254 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 RPS26P62854 115 aaKnown RBP10.33□□□□□ -0.76
VCP-204ENST00000466100 RNF4P78317 190 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 SLC25A3Q00325 362 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 ZNF155Q12901 538 aaPredicted RBP10.33□□□□□ -0.76
VCP-204ENST00000466100 CHAF1BQ13112 559 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 ART3Q13508 389 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 MYBPC3Q14896 1274 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 RGNQ15493 299 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 CT45A2Q5DJT8 189 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 RABL3Q5HYI8 236 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 H3F3CQ6NXT2 135 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 CDC73Q6P1J9 531 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 ZCCHC12Q6PEW1 402 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 BHLHB9Q6PI77 547 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 HSDL2Q6YN16 418 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms