RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 MC3RP41968 323 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 PPICP45877 212 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 PPP2R2AP63151 447 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 NTRK2Q16620 822 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 CT45A2Q5DJT8 189 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 ATCAYQ86WG3 371 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 ZFP62Q8NB50 900 aaPredicted RBP16.3■□□□□ 0.2
VPS52-214ENST00000463486 ST6GALNAC3Q8NDV1 305 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 OR7A2PQ8NGA2 310 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 SLC22A8Q8TCC7 542 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 PAQR8Q8TEZ7 354 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 TMEM125Q96AQ2 219 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 PPCDCQ96CD2 204 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 MAELQ96JY0 434 aaKnown RBP16.3■□□□□ 0.2
VPS52-214ENST00000463486 TIMMDC1Q9NPL8 285 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 ACSS1Q9NUB1 689 aaPredicted RBP16.3■□□□□ 0.2
VPS52-214ENST00000463486 MARCOQ9UEW3 520 aaPredicted RBP16.3■□□□□ 0.2
VPS52-214ENST00000463486 C19orf53Q9UNZ5 99 aaPredicted RBP16.3■□□□□ 0.2
VPS52-214ENST00000463486 CFL2Q9Y281 166 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 NPFFR2Q9Y5X5 522 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 CHCHD2Q9Y6H1 151 aaPredicted RBP16.3■□□□□ 0.2
VPS52-214ENST00000463486 TO15178 435 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 PDPK1O15530 556 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 VPS4BO75351 444 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 BCAS2O75934 225 aaPredicted RBP16.29■□□□□ 0.2
VPS52-214ENST00000463486 SLITRK5O94991 958 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 ALDOCP09972 364 aaKnown RBP16.29■□□□□ 0.2
VPS52-214ENST00000463486 EDN3P14138 238 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 CLDN8P56748 225 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 KCNC4Q03721 635 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 C6orf163Q5TEZ5 329 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 OGFOD2Q6N063 350 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 TMEM107Q6UX40 140 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 NPSR1Q6W5P4 371 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 TAGAPQ8N103 731 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 OR10G3Q8NGC4 313 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 LCORQ96JN0 433 aaPredicted RBP16.29■□□□□ 0.2
VPS52-214ENST00000463486 BTBD9Q96Q07 612 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 WDR55Q9H6Y2 383 aaPredicted RBP16.29■□□□□ 0.2
VPS52-214ENST00000463486 NOP53Q9NZM5 478 aaKnown RBP16.29■□□□□ 0.2
VPS52-214ENST00000463486 SH3BP4Q9P0V3 963 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 NTMQ9P121 344 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 PRODH2Q9UF12 536 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 VPS4AQ9UN37 437 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 EIF3LQ9Y262 564 aaKnown RBP16.29■□□□□ 0.2
VPS52-214ENST00000463486 KLF13Q9Y2Y9 288 aaPredicted RBP16.29■□□□□ 0.2
VPS52-214ENST00000463486 EML6Q6ZMW3 1958 aa16.29■□□□□ 0.2
VPS52-214ENST00000463486 USP9YO00507 2555 aaPredicted RBP16.29■□□□□ 0.2
VPS52-214ENST00000463486 ZGRF1Q86YA3 2104 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 CRYABP02511 175 aaKnown RBP16.28■□□□□ 0.2
VPS52-214ENST00000463486 LBPP18428 481 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 PRPS1L1P21108 318 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 CNR1P21554 472 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 ABCD3P28288 659 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 NTSP30990 170 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 MAP3K8P41279 467 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 MEOX1P50221 254 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 CDK9P50750 372 aaKnown RBP16.28■□□□□ 0.2
VPS52-214ENST00000463486 GPR85P60893 370 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 DCAF7P61962 342 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 FOXO1Q12778 655 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 MAD2L1Q13257 205 aaPredicted RBP16.28■□□□□ 0.2
VPS52-214ENST00000463486 MLC1Q15049 377 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 HLA-DQA1Q5Y7H0 255 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 DESI1Q6ICB0 168 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 R3HCC1LQ7Z5L2 792 aaKnown RBP16.28■□□□□ 0.2
VPS52-214ENST00000463486 CAMKMTQ7Z624 323 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 CHERPQ8IWX8 916 aaKnown RBP16.28■□□□□ 0.2
VPS52-214ENST00000463486 DND1Q8IYX4 353 aaKnown RBP16.28■□□□□ 0.2
VPS52-214ENST00000463486 GOLGA6L1Q8N7Z2 621 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 OR2M7Q8NG81 312 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 PIWIL2Q8TC59 973 aaKnown RBP16.28■□□□□ 0.2
VPS52-214ENST00000463486 HOXB13Q92826 284 aaPredicted RBP16.28■□□□□ 0.2
VPS52-214ENST00000463486 HSPBAP1Q96EW2 488 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 C7orf26Q96N11 449 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 FOLH1BQ9HBA9 442 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 SLCO1B3Q9NPD5 702 aa16.28■□□□□ 0.2
VPS52-214ENST00000463486 SIRT3Q9NTG7 399 aaPredicted RBP16.28■□□□□ 0.2
VPS52-214ENST00000463486 CNOT11Q9UKZ1 510 aaKnown RBP16.28■□□□□ 0.2
VPS52-214ENST00000463486 FLNBO75369 2602 aaKnown RBP16.27■□□□□ 0.2
VPS52-214ENST00000463486 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 ANKUB1A6NFN9 424 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 FRG2CA6NGY1 282 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 G3V3Y1 287 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 KLRC4-KLRK1H3BQV0 150 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 ACOX3O15254 700 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 GLSO94925 669 aaPredicted RBP16.27■□□□□ 0.2
VPS52-214ENST00000463486 ABCB1P08183 1280 aaPredicted RBP16.27■□□□□ 0.2
VPS52-214ENST00000463486 KITP10721 976 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 NAGAP17050 411 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 EFNA1P20827 205 aaPredicted RBP16.27■□□□□ 0.2
VPS52-214ENST00000463486 EPHA3P29320 983 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 HPCAL1P37235 193 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 RFC3P40938 356 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 CORO7P57737 925 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 FBXW4P57775 412 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 PSG6Q00889 435 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 NNATQ16517 81 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 EIF2S3LQ2VIR3 472 aaKnown RBP16.27■□□□□ 0.2
VPS52-214ENST00000463486 SLC9B1Q4ZJI4 515 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms