RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ZNF675Q8TD23 568 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 PAQR8Q8TEZ7 354 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 DIO2Q92813 273 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 GFM2Q969S9 779 aaKnown RBP14.16□□□□□ -0.14
VARS-219ENST00000461328 ADIPOR1Q96A54 375 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 JSRP1Q96MG2 331 aaPredicted RBP14.16□□□□□ -0.14
VARS-219ENST00000461328 TSSK3Q96PN8 268 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 PHF12Q96QT6 1004 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 CCT7Q99832 543 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 PAIP2Q9BPZ3 127 aaKnown RBP14.16□□□□□ -0.14
VARS-219ENST00000461328 DOHHQ9BU89 302 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 TUBB1Q9H4B7 451 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 IL1RL2Q9HB29 575 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 CNIH4Q9P003 139 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 BOKQ9UMX3 212 aaPredicted RBP14.16□□□□□ -0.14
VARS-219ENST00000461328 WBP11Q9Y2W2 641 aaKnown RBP14.16□□□□□ -0.14
VARS-219ENST00000461328 CCL27Q9Y4X3 112 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 NPFFR2Q9Y5X5 522 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.16□□□□□ -0.14
VARS-219ENST00000461328 E9PLN8 166 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 LSM1O15116 133 aaKnown RBP14.15□□□□□ -0.14
VARS-219ENST00000461328 HNRNPRO43390 633 aaKnown RBP14.15□□□□□ -0.14
VARS-219ENST00000461328 BCAS2O75934 225 aaPredicted RBP14.15□□□□□ -0.14
VARS-219ENST00000461328 GLSO94925 669 aaPredicted RBP14.15□□□□□ -0.14
VARS-219ENST00000461328 ZWINTO95229 277 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 SERPINE1P05121 402 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 JUNP05412 331 aaKnown RBP14.15□□□□□ -0.14
VARS-219ENST00000461328 FGF4P08620 206 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 AGAP20933 346 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 HTR1EP28566 365 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 RPP38P78345 283 aaKnown RBP14.15□□□□□ -0.14
VARS-219ENST00000461328 PLCXD2Q0VAA5 305 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 ZNF155Q12901 538 aaPredicted RBP14.15□□□□□ -0.14
VARS-219ENST00000461328 DUSP8Q13202 625 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 NTRK2Q16620 822 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 NCCRP1Q6ZVX7 275 aaPredicted RBP14.15□□□□□ -0.14
VARS-219ENST00000461328 FAM109AQ8N4B1 249 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 TMEM251Q8N6I4 163 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 ANKRD42Q8N9B4 389 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 CLHC1Q8NHS4 586 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 CTHRC1Q96CG8 243 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 ERP27Q96DN0 273 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 PGM2Q96G03 612 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 LCORQ96JN0 433 aaPredicted RBP14.15□□□□□ -0.14
VARS-219ENST00000461328 VKORC1Q9BQB6 163 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 NXF5Q9H1B4 397 aaKnown RBP14.15□□□□□ -0.14
VARS-219ENST00000461328 ZDHHC11Q9H8X9 412 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 ANKRA2Q9H9E1 313 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 PLSCR2Q9NRY7 297 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 TUBA8Q9NY65 449 aaPredicted RBP14.15□□□□□ -0.14
VARS-219ENST00000461328 ZNF639Q9UID6 485 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 TMED5Q9Y3A6 229 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 ACTL7BQ9Y614 415 aa14.15□□□□□ -0.14
VARS-219ENST00000461328 CHCHD2Q9Y6H1 151 aaPredicted RBP14.15□□□□□ -0.14
VARS-219ENST00000461328 NPIPB8E9PQR5 432 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 PDPK1O15530 556 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 AKAP10O43572 662 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 COQ9O75208 318 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 SDC1P18827 310 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 TACR1P25103 407 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 ABCD3P28288 659 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 MAPK1P28482 360 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 GRNP28799 593 aaKnown RBP14.14□□□□□ -0.15
VARS-219ENST00000461328 MAGEA5P43359 124 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 DCAF7P61962 342 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 KIAA0040Q15053 153 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 TMEM107Q6UX40 140 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 Q6ZSR9 355 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 SIMC1Q8NDZ2 872 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 PHF10Q8WUB8 498 aaKnown RBP14.14□□□□□ -0.15
VARS-219ENST00000461328 MARVELD3Q96A59 401 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 PPCDCQ96CD2 204 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 EGLN2Q96KS0 407 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 ZNF597Q96LX8 424 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 PPP3R2Q96LZ3 170 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 EXO5Q9H790 373 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 SH2D2AQ9NP31 389 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 CHST11Q9NPF2 352 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 B4GALT7Q9UBV7 327 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 ZDHHC2Q9UIJ5 367 aa14.14□□□□□ -0.15
VARS-219ENST00000461328 ATP6AP2A0A1C7CYW4 349 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 FRG2CA6NGY1 282 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 MYO1GB0I1T2 1018 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 TMEM114B3SHH9 223 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 ADAM10O14672 748 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 ACOX3O15254 700 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 BIRC5O15392 142 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 PEX11AO75192 247 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 LYPLA1O75608 230 aaPredicted RBP14.13□□□□□ -0.15
VARS-219ENST00000461328 PPM1BO75688 479 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 ATP6AP2O75787 350 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 ARRB2P32121 409 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 GPC1P35052 558 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 KRT20P35900 424 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 HPCAL1P37235 193 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 MC3RP41968 323 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 ASMTP46597 345 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 MASP1P48740 699 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 EMDP50402 254 aa14.13□□□□□ -0.15
VARS-219ENST00000461328 ABCE1P61221 599 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms