RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 CACNB2Q08289 660 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 OR2F1Q13607 317 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 RAB30Q15771 203 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 RTL8BQ17RB0 113 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 CYB5R2Q6BCY4 276 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 SLC24A5Q71RS6 500 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 KIAA0319LQ8IZA0 1049 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 MYLIPQ8WY64 445 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 FAM46AQ96IP4 442 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 DPEP3Q9H4B8 488 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 COMMD3Q9UBI1 195 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 DNAJC5BQ9UF47 199 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 NOCTQ9UK39 431 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 PLXNB2O15031 1838 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TLR5O60602 858 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 GJB1P08034 283 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 CHRNB1P11230 501 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 PRSS3P35030 304 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 NR0B1P51843 470 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 INHBCP55103 352 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 GRM2Q14416 872 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 OR52E8Q6IFG1 317 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TSSK4Q6SA08 328 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 SYNE4Q8N205 404 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 YIPF7Q8N8F6 280 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 AQP11Q8NBQ7 271 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 GGHQ92820 318 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TMBIM1Q969X1 311 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 BORCS8Q96FH0 119 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF558Q96NG5 402 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 MGLLQ99685 303 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ABCG8Q9H221 673 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 C11orf16Q9NQ32 467 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ACSL6Q9UKU0 697 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 OR6C65A6NJZ3 312 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TYROBPO43914 113 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 SNNO75324 88 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 PAGE1O75459 146 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 HTR2BP41595 481 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TSFMP43897 325 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 MASP1P48740 699 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 CHIT1Q13231 466 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 SLC17A1Q14916 467 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 DUSP28Q4G0W2 176 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 C6orf183Q5T699 404 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 STEAP4Q687X5 459 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 LAS2Q8IYD9 372 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 NAT8LQ8N9F0 302 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 STK35Q8TDR2 534 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TBC1D20Q96BZ9 403 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 DUS2Q9NX74 493 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 SLC35A3Q9Y2D2 325 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 CBY3A6NI87 242 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 E9PAM4 449 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TP73O15350 636 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 C1RP00736 705 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TK1P04183 234 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 RAC2P15153 192 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 DOC2AQ14183 400 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 FAM74A1Q5RGS3 127 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF101Q8IZC7 436 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 CERS5Q8N5B7 392 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 DAZLQ92904 295 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ACSF2Q96CM8 615 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 L3HYPDHQ96EM0 354 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 OCSTAMPQ9BR26 566 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TOR3AQ9H497 397 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF286AQ9HBT8 521 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 RXFP3Q9NSD7 469 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 C1orf123Q9NWV4 160 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 LRFN1Q9P244 771 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM181Q9P2C4 612 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM63AO94886 807 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ADH1BP00325 375 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 LINC00032P0C843 101 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF35P13682 527 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 AMD1P17707 334 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 NELFEP18615 380 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 CXCR1P25024 350 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 DCAF7P61962 342 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 MC2RQ01718 297 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF155Q12901 538 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 SERTAD2Q14140 314 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 CYP27C1Q4G0S4 372 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ZC3H14Q6PJT7 736 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 C2CD4AQ8NCU7 369 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TRAPPC12Q8WVT3 735 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 RPL3LQ92901 407 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ABCB8Q9NUT2 735 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 PCDHB14Q9Y5E9 798 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 MARF1Q9Y4F3 1742 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 OR6C74A6NCV1 312 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ZSCAN5BA6NJL1 495 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 LACTBL1A8MY62 500 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 GPR37L1O60883 481 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 AKAIN1P0CW23 69 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 PTPN6P29350 595 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 CRABP1P29762 137 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 PAN2Q504Q3 1202 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 EDEM1Q92611 657 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms