RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 ILKQ13418 452 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 DGCR6Q14129 220 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 IL11RAQ14626 422 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 RNF220Q5VTB9 566 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 ZC3H14Q6PJT7 736 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 C16orf62Q7Z3J2 963 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 SLITRK4Q8IW52 837 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 ZNF440Q8IYI8 595 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 ALDH16A1Q8IZ83 802 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 MMP21Q8N119 569 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 GALNT4Q8N4A0 578 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 DEFB119Q8N690 84 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 C17orf47Q8NEP4 570 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC39A7Q92504 469 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 ZNF566Q969W8 418 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 RBM18Q96H35 190 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 TGM7Q96PF1 710 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 APOL4Q9BPW4 351 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 G6PC3Q9BUM1 346 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 GABARAPL3Q9BY60 117 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 CAAP1Q9H8G2 361 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 SYNPO2LQ9H987 977 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 ZNF556Q9HAH1 456 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 CXorf21Q9HAI6 301 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 MAT2BQ9NZL9 334 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 TRPC4Q9UBN4 977 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC13A4Q9UKG4 626 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 MGAT4BQ9UQ53 548 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 CLCA2Q9UQC9 943 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 SAMHD1Q9Y3Z3 626 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 KMT2EQ8IZD2 1858 aa6.4□□□□□ -1.39
ECHDC1-210ENST00000454859 IGLV3-12A0A075B6K2 115 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 SMIM31A0A1B0GVY4 71 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 A0A1B0GX78 115 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 A6NHS1 94 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 TMEM150CB9EJG8 249 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 TNFRSF11BO00300 401 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 OR10H2O60403 315 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 TPST1O60507 370 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 B4GALT2O60909 372 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 ADAP00813 363 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 FESP07332 822 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 NUDT7P0C024 238 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 PABPC4LP0CB38 370 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 OR12D1P0DN82 309 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 GSTM3P21266 225 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 ALDH4A1P30038 563 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 FEN1P39748 380 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 MC3RP41968 323 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 OR1D5P58170 312 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 ESRRGP62508 458 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 VLDLRP98155 873 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 ALDH6A1Q02252 535 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 MGAT2Q10469 447 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 STX4Q12846 297 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 NRF1Q16656 503 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 MICAQ29983 383 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 PROX2Q3B8N5 592 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 CYP27C1Q4G0S4 372 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 BORAQ6PGQ7 559 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 TMEM107Q6UX40 140 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 TSPYL5Q86VY4 417 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 GRAMD2AQ8IUY3 354 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 GALNT12Q8IXK2 581 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF619Q8N2I2 560 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 VWA5B2Q8N398 1253 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 FAM86B1Q8N7N1 296 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 PLPP5Q8NEB5 264 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 OR4C15Q8NGM1 316 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 OR9A2Q8NGT5 310 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 OR5AK3PQ8NH89 298 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 FBLIM1Q8WUP2 373 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 XAGE5Q8WWM1 108 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 HDAC2Q92769 488 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 CCDC74AQ96AQ1 378 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 TPD52L3Q96J77 140 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 LRFN5Q96NI6 719 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 DGAT2Q96PD7 388 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 PITX2Q99697 317 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 ARHGDIGQ99819 225 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 DGCR6LQ9BY27 220 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF350Q9GZX5 532 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 LRRN3Q9H3W5 708 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 KRCC1Q9NPI7 259 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 RAB23Q9ULC3 237 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 TMCC3Q9ULS5 477 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 HCN4Q9Y3Q4 1203 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 PCDHGA10Q9Y5H3 936 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 LYVE1Q9Y5Y7 322 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 TECTAO75443 2155 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 A0A0G2JN53 185 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 H3BNH8 94 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 FLRT2O43155 660 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 RPSAP08865 295 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 CCDC159P0C7I6 412 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 SP9P0CG40 484 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 IGFBP5P24593 272 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 TRHRP34981 398 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 GRK6P43250 576 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 ERFP50548 548 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms