RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 ABATP80404 500 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 DNASE1L3Q13609 305 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 NFE2L1Q14494 772 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 DUSP7Q16829 419 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 ITPRIPL2Q3MIP1 535 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 C3orf38Q5JPI3 329 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 ENTPD8Q5MY95 495 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 C9orf64Q5T6V5 341 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 ATAD3BQ5T9A4 648 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 METRNLQ641Q3 311 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 TCTN3Q6NUS6 607 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 PGBD2Q6P3X8 592 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 NANOGP1Q8N7R0 232 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 GPR32P1Q8NGA4 272 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 OR56A1Q8NGH5 318 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 SUN3Q8TAQ9 357 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 HPS1Q92902 700 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 FOXJ1Q92949 421 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 PRRC1Q96M27 445 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 OPALINQ96PE5 141 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 CENPOQ9BU64 300 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 PINK1Q9BXM7 581 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 ARRDC1-AS1Q9H2J1 176 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 RMI1Q9H9A7 625 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 INIPQ9NRY2 104 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 SIRT3Q9NTG7 399 aaPredicted RBP9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 DEC1Q9P2X7 70 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 HCN2Q9UL51 889 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 PCDHGB2Q9Y5G2 931 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 SNX8Q9Y5X2 465 aa9.99□□□□□ -0.81
GTF3C2-206ENST00000454704 EML5Q05BV3 1969 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 TMEM129A0AVI4 362 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 OTOL1A6NHN0 477 aaPredicted RBP9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 HMGN4O00479 90 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 FFAR1O14842 300 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 SLC28A2O43868 658 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 SH3BGRLO75368 114 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 NME6O75414 186 aaPredicted RBP9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 DLGAP3O95886 979 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 SLC35G4P0C7Q5 338 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 PTBP1P26599 531 aaKnown RBP eCLIP9.98□□□□□ -0.817e-7■■■■□ 25.3
GTF3C2-206ENST00000454704 GRK5P34947 590 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 GSSP48637 474 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 SMSP52788 366 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 BNC1Q01954 994 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 ZNF91Q05481 1191 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 RAB40BQ12829 278 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 GANABQ14697 944 aaKnown RBP9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 PDGFRLQ15198 375 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 MAPK11Q15759 364 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 KIAA1161Q6NSJ0 714 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 ZNF544Q6NX49 715 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 C1orf94Q6P1W5 598 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 HSDL2Q6YN16 418 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 MRGPREQ86SM8 312 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 CYP4Z2PQ8N1L4 340 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 FAM181AQ8N9Y4 354 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 SORCS1Q8WY21 1168 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 AP3S1Q92572 193 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 CHFRQ96EP1 664 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 CTRCQ99895 268 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 TIMM29Q9BSF4 260 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 SARGQ9BW04 601 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 ASPNQ9BXN1 380 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 TEX12Q9BXU0 123 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 SMOC1Q9H4F8 434 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 HHATLQ9HCP6 504 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 AMBNQ9NP70 447 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 FGF20Q9NP95 211 aaPredicted RBP9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 RXFP3Q9NSD7 469 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 TAC3Q9UHF0 121 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 ITM2BQ9Y287 266 aa9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 EXOSC1Q9Y3B2 195 aaKnown RBP9.98□□□□□ -0.81
GTF3C2-206ENST00000454704 A0A0A6YYD5 115 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 TRBV4-1A0A0J9YWV2 114 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 GSAPA4D1B5 854 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 H3BN98 237 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 SAP18O00422 153 aaKnown RBP9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 ENTPD6O75354 484 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 CSO75390 466 aaKnown RBP9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 AGR2O95994 175 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 EGFP01133 1207 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 GBAP04062 536 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 HSMCR30P0CW71 290 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 NR2F6P10588 404 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 CPEP16870 476 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 ALOX12P18054 663 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 CFL1P23528 166 aaKnown RBP9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 AHRP35869 848 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 RPS5P46782 204 aaKnown RBP9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 PCYT1AP49585 367 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 CDK5Q00535 292 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 SSX1Q16384 188 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 CCDC92Q53HC0 331 aaPredicted RBP9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 TMEM196Q5HYL7 178 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 OR4C11Q6IEV9 310 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 TNFAIP8L2Q6P589 184 aaPredicted RBP9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 HEATR4Q86WZ0 1026 aa9.97□□□□□ -0.81
GTF3C2-206ENST00000454704 ADGRF3Q8IZF5 1079 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms