RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 HOXD4P09016 255 aaPredicted RBP9.8□□□□□ -0.84
DDX39A-203ENST00000454233 RFPL3SP0C7P2 107 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 UROSP10746 265 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 GABRA1P14867 456 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 PCSK2P16519 638 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 DRD5P21918 477 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 CHRNB4P30926 498 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 MPIP34949 423 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 PPICP45877 212 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 MRPS35P82673 323 aaKnown RBP9.8□□□□□ -0.84
DDX39A-203ENST00000454233 DUSP2Q05923 314 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 SLC18A2Q05940 514 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 C2orf80Q0P641 193 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 PLCXD2Q0VAA5 305 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 PMPCAQ10713 525 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 CDSNQ15517 529 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 B3GNT6Q6ZMB0 384 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 NUP54Q7Z3B4 507 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 TRIM46Q7Z4K8 759 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 GDF7Q7Z4P5 450 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 HOMEZQ8IX15 550 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 FAM9CQ8IZT9 166 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 MARVELD2Q8N4S9 558 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 OR10Q1Q8NGQ4 319 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 NEIL3Q8TAT5 605 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 FAM76AQ8TAV0 307 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 OMA1Q96E52 524 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 C11orf24Q96F05 449 aaPredicted RBP9.8□□□□□ -0.84
DDX39A-203ENST00000454233 BBS4Q96RK4 519 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 ANGPTL4Q9BY76 406 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 SLC6A15Q9H2J7 730 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 C12orf65Q9H3J6 166 aaKnown RBP9.8□□□□□ -0.84
DDX39A-203ENST00000454233 MIEF1Q9NQG6 463 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 ALKBH4Q9NXW9 302 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 TNFRSF10DQ9UBN6 386 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 RNF6Q9Y252 685 aa9.8□□□□□ -0.84
DDX39A-203ENST00000454233 WBP11Q9Y2W2 641 aaKnown RBP9.8□□□□□ -0.84
DDX39A-203ENST00000454233 CACNA1CQ13936 2221 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 FRG2CA6NGY1 282 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 FAM47E-STBD1D6RA91 191 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 SLC28A1O00337 649 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 TRIM13O60858 407 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 TRAPPC6AO75865 159 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 RSL1D1O76021 490 aaKnown RBP9.79□□□□□ -0.84
DDX39A-203ENST00000454233 CHEK2O96017 543 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 NUDT17P0C025 328 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 PRF1P14222 555 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 DDCP20711 480 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 ELAVL4P26378 380 aaKnown RBP9.79□□□□□ -0.84
DDX39A-203ENST00000454233 NTSP30990 170 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 KRT20P35900 424 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 CASP3P42574 277 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 TRPC1P48995 793 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 EMDP50402 254 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 NUP107P57740 925 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 VSNL1P62760 191 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 PSPHP78330 225 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 DUSP8Q13202 625 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 TOMM20Q15388 145 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 ZNF628Q5EBL2 1059 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 C1orf185Q5T7R7 199 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 BICRALQ6AI39 1079 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 C10orf107Q8IVU9 208 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 SRRM1Q8IYB3 904 aaKnown RBP9.79□□□□□ -0.84
DDX39A-203ENST00000454233 RPRMLQ8N4K4 120 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 OR9A2Q8NGT5 310 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 OR2W6PQ8NHA6 318 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 LILRB4Q8NHJ6 448 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 KAT2AQ92830 837 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 TMEM41AQ96HV5 264 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 APOPT1Q96IL0 206 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 METTL2AQ96IZ6 378 aaKnown RBP9.79□□□□□ -0.84
DDX39A-203ENST00000454233 TTYH2Q9BSA4 534 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 TRMOQ9BU70 441 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 STMN4Q9H169 189 aaPredicted RBP9.79□□□□□ -0.84
DDX39A-203ENST00000454233 MYNNQ9NPC7 610 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 MKS1Q9NXB0 559 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 KLRF1Q9NZS2 232 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 POLR3HQ9Y535 204 aaPredicted RBP9.79□□□□□ -0.84
DDX39A-203ENST00000454233 PCDHGB3Q9Y5G1 929 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 PKDREJQ9NTG1 2253 aa9.79□□□□□ -0.84
DDX39A-203ENST00000454233 TEX15Q9BXT5 2789 aa9.78□□□□□ -0.84
DDX39A-203ENST00000454233 C15orf38-AP3S2A0A0A6YYH1 394 aa9.78□□□□□ -0.84
DDX39A-203ENST00000454233 FAM90A27PA6NNH2 459 aa9.78□□□□□ -0.84
DDX39A-203ENST00000454233 C19orf84I3L1E1 186 aa9.78□□□□□ -0.84
DDX39A-203ENST00000454233 GNB5O14775 395 aa9.78□□□□□ -0.84
DDX39A-203ENST00000454233 AZIN1O14977 448 aa9.78□□□□□ -0.84
DDX39A-203ENST00000454233 TO15178 435 aa9.78□□□□□ -0.84
DDX39A-203ENST00000454233 RGS14O43566 566 aa9.78□□□□□ -0.84
DDX39A-203ENST00000454233 PLOD3O60568 738 aa9.78□□□□□ -0.84
DDX39A-203ENST00000454233 ABCB7O75027 752 aa9.78□□□□□ -0.84
DDX39A-203ENST00000454233 COQ9O75208 318 aa9.78□□□□□ -0.84
DDX39A-203ENST00000454233 SEC22BO75396 215 aa9.78□□□□□ -0.84
DDX39A-203ENST00000454233 ERN1O75460 977 aaKnown RBP9.78□□□□□ -0.84
DDX39A-203ENST00000454233 REM1O75628 298 aa9.78□□□□□ -0.84
DDX39A-203ENST00000454233 SLITRK5O94991 958 aa9.78□□□□□ -0.84
DDX39A-203ENST00000454233 SLU7O95391 586 aaKnown RBP9.78□□□□□ -0.84
DDX39A-203ENST00000454233 NEFHP12036 1026 aa9.78□□□□□ -0.84
DDX39A-203ENST00000454233 ENDOUP21128 410 aaKnown RBP9.78□□□□□ -0.84
DDX39A-203ENST00000454233 GCKP35557 465 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms