RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 Q6ZPB1 254 aaPredicted RBP16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 COMMD6Q7Z4G1 85 aa16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 OR4N5Q8IXE1 308 aa16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 GPALPP1Q8IXQ4 340 aa16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 C1orf52Q8N6N3 182 aaKnown RBP16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 OR5L2Q8NGL0 311 aa16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 SLC2A12Q8TD20 617 aa16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 DGAT2Q96PD7 388 aa16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 SORBS1Q9BX66 1292 aaKnown RBP16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 MRPL1Q9BYD6 325 aaKnown RBP16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 PHF11Q9UIL8 331 aa16.68■□□□□ 0.26
SQSTM1-204ENST00000453046 ERICH4A6NGS2 130 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 ZNHIT1O43257 154 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 HS6ST1O60243 411 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 G6PDP11413 515 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 BCKDHAP12694 445 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 SDC1P18827 310 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 GPX3P22352 226 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 NOXRED1Q6NXP6 359 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 BNC2Q6ZN30 1099 aaPredicted RBP16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 ZNF771Q7L3S4 317 aaPredicted RBP16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 PAGE2Q7Z2X7 111 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 GPR180Q86V85 440 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 EID3Q8N140 333 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 LIX1Q8N485 282 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 ZNF321PQ8N8H1 164 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 PSD4Q8NDX1 1056 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 ANKRD9Q96BM1 317 aaPredicted RBP16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 CMTM5Q96DZ9 223 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 RBM18Q96H35 190 aaKnown RBP16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 RASL10BQ96S79 203 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 RPF2Q9H7B2 306 aaKnown RBP16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 CHST11Q9NPF2 352 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 TAGLN3Q9UI15 199 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 MCM8Q9UJA3 840 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 ADAM29Q9UKF5 820 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 DLGAP4Q9Y2H0 992 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 MEMO1Q9Y316 297 aa16.67■□□□□ 0.26
SQSTM1-204ENST00000453046 TMEM200CA6NKL6 621 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 PLPP1O14494 284 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 ANKRD28O15084 1053 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 PCDH7O60245 1069 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 FGF17O60258 216 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 HNRNPCL1O60812 293 aaKnown RBP16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 ATP5HO75947 161 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 OR6B1O95007 311 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 CALB2P22676 271 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 HTR1EP28566 365 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 PTGER1P34995 402 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 BUD31P41223 144 aaPredicted RBP16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 SOX3P41225 446 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 GSTM5P46439 218 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 ASMTP46597 345 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 RNF4P78317 190 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 PLGLB1Q02325 96 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 ZNF763Q0D2J5 394 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 BNIP1Q12981 228 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 BIKQ13323 160 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 NUDT13Q86X67 352 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 OR8K3Q8NH51 312 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 TANKQ92844 425 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 ZNF717Q9BY31 904 aaPredicted RBP16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 MAPRE3Q9UPY8 281 aa16.66■□□□□ 0.26
SQSTM1-204ENST00000453046 A0A1B0GTH9 108 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 GRNP28799 593 aaKnown RBP16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 PTGS2P35354 604 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 STT3AP46977 705 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 CLNS1AP54105 237 aaKnown RBP16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 C21orf58P58505 322 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 RAE1P78406 368 aaKnown RBP16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 ADORA2A-AS1P86434 159 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 PLIN5Q00G26 463 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 TNFRSF17Q02223 184 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 FOLH1Q04609 750 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 RCAN2Q14206 197 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 AGKQ53H12 422 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 C18orf63Q68DL7 685 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 PAOXQ6QHF9 649 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 C3P1Q6ZMU1 363 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 ZCCHC7Q8N3Z6 543 aaKnown RBP16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 ZFP62Q8NB50 900 aaPredicted RBP16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 GLB1L3Q8NCI6 653 aaPredicted RBP16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 C16orf52Q8NHV5 167 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 RP9Q8TA86 221 aaKnown RBP16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 TSPEARQ8WU66 669 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 PPWD1Q96BP3 646 aaKnown RBP16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 ART5Q96L15 291 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 WDR41Q9HAD4 459 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 ARL8BQ9NVJ2 186 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 LYARQ9NX58 379 aaKnown RBP16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 ATG4BQ9Y4P1 393 aa16.65■□□□□ 0.26
SQSTM1-204ENST00000453046 PCNX1Q96RV3 2341 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 CREBBPQ92793 2442 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 FAM234BA2RU67 622 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 ACOT7O00154 380 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 SLC22A3O75751 556 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 PDE9AO76083 593 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 TPOP07202 933 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 COX4I1P13073 169 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 AGAP20933 346 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms