RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 MFSD14CQ5VZR4 134 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 C11orf63Q6NUN7 778 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 FAM71F2Q6NXP2 309 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 H3F3CQ6NXT2 135 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 FAM171BQ6P995 826 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 VITQ6UXI7 678 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 PLEKHG7Q6ZR37 379 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLC35D2Q76EJ3 337 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 GPR141Q7Z602 305 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 SERPINA11Q86U17 422 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 PARGQ86W56 976 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 KMT5CQ86Y97 462 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 MUC20Q8N307 709 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 MARVELD2Q8N4S9 558 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 PCDH20Q8N6Y1 951 aaKnown RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 CCDC185Q8N715 623 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 BMPERQ8N8U9 685 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 THAP8Q8NA92 274 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR7G2Q8NG99 324 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR9G4Q8NGQ1 327 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 NEU4Q8WWR8 484 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 HTR3CQ8WXA8 447 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 GTF2H4Q92759 462 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 DAZLQ92904 295 aaKnown RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZBTB9Q96C00 473 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 C10orf35Q96D05 121 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 MED30Q96HR3 178 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 SGK494Q96LW2 274 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 CTRCQ99895 268 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 NDUFAF3Q9BU61 184 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR2B2Q9GZK3 357 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 KCNN2Q9H2S1 579 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 DPEP2Q9H4A9 486 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 METTL8Q9H825 291 aaKnown RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLC38A10Q9HBR0 1119 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 CYSLTR2Q9NS75 346 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 LYARQ9NX58 379 aaKnown RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 MIS18AQ9NYP9 233 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLC17A7Q9P2U7 560 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 LHX3Q9UBR4 397 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 PLEKHB1Q9UF11 243 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLC7A8Q9UHI5 535 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 PHF11Q9UIL8 331 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 NAGKQ9UJ70 344 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 KCNE5Q9UJ90 142 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 MRTO4Q9UKD2 239 aaKnown RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 ACSL5Q9ULC5 683 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 SH2B3Q9UQQ2 575 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 WDR83OSQ9Y284 106 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 TMED3Q9Y3Q3 217 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 TESMINQ9Y4I5 508 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 RNF115Q9Y4L5 304 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 USP16Q9Y5T5 823 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 ATP10DQ9P241 1426 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 MROH7-TTC4A0A0A0MT08 1334 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 CGNL1Q0VF96 1302 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 TRGV11A0A075B6L2 103 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 HYKKA2RU49 373 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 SMCO2A6NFE2 343 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 CASTOR2A6NHX0 329 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 ARHGEF33A8MVX0 844 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 E5RGE8 158 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 SYT7O43581 403 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR2J3O76001 311 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 CLDN7O95471 211 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 EPOP01588 193 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 KRT7P08729 469 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 GOLGA8HP0CJ92 632 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 CD58P19256 250 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 MSH3P20585 1137 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 STOMP27105 288 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 ITPKBP27987 946 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 EIF2S3P41091 472 aaKnown RBP4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 CDKN2CP42773 168 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 ACADSBP45954 432 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 PCYT1AP49585 367 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 HNRNPMP52272 730 aaKnown RBP eCLIP4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 ACLYP53396 1101 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 PLA2G16P53816 162 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 ATP1B3P54709 279 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 ATP5J2P56134 94 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 CLDN15P56746 228 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 GPX6P59796 221 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 PPIAP62937 165 aaKnown RBP4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 HERVK_113P63132 956 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 FOXL1Q12952 345 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 GAGE2BQ13066 116 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 MADCAM1Q13477 382 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 MRPL23Q16540 153 aaKnown RBP4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 PSG3Q16557 428 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 EIF2S3LQ2VIR3 472 aaKnown RBP4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZNF528Q3MIS6 628 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 GAGE2EQ4V326 116 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 KLHL22Q53GT1 634 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 XKR4Q5GH76 650 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLC22A10Q63ZE4 541 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 METRNLQ641Q3 311 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 NADSYN1Q6IA69 706 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR52W1Q6IF63 320 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 GAGE2AQ6NT46 116 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms