RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 CD300LDQ6UXZ3 194 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 RBM44Q6ZP01 1051 aaKnown RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 GALNT5Q7Z7M9 940 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 STK32CQ86UX6 486 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 CLIP4Q8N3C7 705 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 SLC7A13Q8TCU3 470 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 HDAC2Q92769 488 aaKnown RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 ZNF350Q9GZX5 532 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 ENPP4Q9Y6X5 453 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 M0R129 80 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 MSL3P1P0C860 447 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 EMDP50402 254 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 GABARAPL2P60520 117 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 HHEXQ03014 270 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 SLC9A5Q14940 896 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 C12orf73Q69YU5 71 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 PGBD2Q6P3X8 592 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 SPEM1Q8N4L4 309 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 ARL10Q8N8L6 244 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 C19orf47Q8N9M1 422 aaKnown RBP6.15□□□□□ -1.42
USP46-202ENST00000451218 ZNF485Q8NCK3 441 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 GANCQ8TET4 914 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 YIPF6Q96EC8 236 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 PIP5K1AQ99755 562 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 EFHD1Q9BUP0 239 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 LHPPQ9H008 270 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 TBC1D17Q9HA65 648 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 ZNF223Q9UK11 482 aaPredicted RBP6.15□□□□□ -1.42
USP46-202ENST00000451218 LSM2Q9Y333 95 aaKnown RBP6.15□□□□□ -1.42
USP46-202ENST00000451218 MPDZO75970 2070 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 PIAS2O75928 621 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 MYO1DO94832 1006 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 MYF5P13349 255 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 GRK5P34947 590 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 SSR2P43308 183 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 NCBP2P52298 156 aaKnown RBP eCLIP6.15□□□□□ -1.42
USP46-202ENST00000451218 DEFB134Q4QY38 66 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 PRAMEF8Q5VWM4 474 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 PRAMEF7Q5VXH5 474 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 ZNF773Q6PK81 442 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 ZDHHC13Q8IUH4 622 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 APLFQ8IW19 511 aaPredicted RBP6.15□□□□□ -1.42
USP46-202ENST00000451218 DHRSXQ8N5I4 330 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 OR8D4Q8NGM9 314 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 SNX19Q92543 992 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 CNDP2Q96KP4 475 aaKnown RBP6.15□□□□□ -1.42
USP46-202ENST00000451218 SLC22A11Q9NSA0 550 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 DDX18Q9NVP1 670 aaKnown RBP6.15□□□□□ -1.42
USP46-202ENST00000451218 RHCGQ9UBD6 479 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 RPS6KA6Q9UK32 745 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 FBXW2Q9UKT8 454 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 MYRFQ9Y2G1 1151 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 ENTPD2Q9Y5L3 495 aa6.15□□□□□ -1.42
USP46-202ENST00000451218 M0R3H8 397 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 LDB3O75112 727 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 DCNP07585 359 aaKnown RBP6.15□□□□□ -1.43
USP46-202ENST00000451218 NGFRP08138 427 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 CTSKP43235 329 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 RACK1P63244 317 aaKnown RBP6.15□□□□□ -1.43
USP46-202ENST00000451218 CHRNEQ04844 493 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 NPRL3Q12980 569 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 SYT16Q17RD7 645 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 DEFB110Q30KQ9 67 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 COX15Q7KZN9 410 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 PAGE2Q7Z2X7 111 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 HIPK1Q86Z02 1210 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 OR4N5Q8IXE1 308 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 NATD1Q8N6N6 113 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 ZNF615Q8N8J6 731 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 KAT2AQ92830 837 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 THAP11Q96EK4 314 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 ZBED6CLQ96FA7 236 aaPredicted RBP6.15□□□□□ -1.43
USP46-202ENST00000451218 RMND5BQ96G75 393 aaPredicted RBP6.15□□□□□ -1.43
USP46-202ENST00000451218 MAP3K3Q99759 626 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 ZNF426Q9BUY5 554 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 PLA2G12AQ9BZM1 189 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 RTN4RQ9BZR6 473 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 LIN28AQ9H9Z2 209 aaKnown RBP6.15□□□□□ -1.43
USP46-202ENST00000451218 GIN1Q9NXP7 522 aa6.15□□□□□ -1.43
USP46-202ENST00000451218 A0A0J9YVX5 310 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 SH3PXD2BA1X283 911 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 LMO7DNF2Z398 122 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 H3BMQ9 156 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 M0R082 166 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 XPNPEP2O43895 674 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 PLOD3O60568 738 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 ZNF217O75362 1048 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 GUSBP08236 651 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 CPMP14384 443 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 MST1P26927 711 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 CD38P28907 300 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 NUDT1P36639 197 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 GPR3P46089 330 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 SIM1P81133 766 aaPredicted RBP6.14□□□□□ -1.43
USP46-202ENST00000451218 TJAP1Q5JTD0 557 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 MANEAQ5SRI9 462 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 ARHGAP22Q7Z5H3 698 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 VRK2Q86Y07 508 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 ARMC8Q8IUR7 673 aa6.14□□□□□ -1.43
USP46-202ENST00000451218 RHOXF1Q8NHV9 184 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms