RNA–Protein interactions for RNA: ENST00000450966.5

USP40-208, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP40, Length 5,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-208ENST00000450966 FYTTD1Q96QD9 318 aaKnown RBP12.69□□□□□ -0.38
USP40-208ENST00000450966 CNTNAP3Q9BZ76 1288 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 SLC19A3Q9BZV2 496 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 WDR26Q9H7D7 661 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 CERS4Q9HA82 394 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 YIPF1Q9Y548 306 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 CLDN4O14493 209 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 CTDSP2O14595 271 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 VEGFBP49765 207 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 UBE2KP61086 200 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 MSS51Q4VC12 460 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 GDF6Q6KF10 455 aaPredicted RBP12.69□□□□□ -0.38
USP40-208ENST00000450966 CD163Q86VB7 1156 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 TCTE3Q8IZS6 198 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 NEK7Q8TDX7 302 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 GPR22Q99680 433 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 AIG1Q9NVV5 245 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 SUSD2Q9UGT4 822 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 XKRYO14609 159 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 TOX4O94842 621 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 FHP07954 510 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 GIPRP48546 466 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 RANP62826 216 aaKnown RBP12.69□□□□□ -0.38
USP40-208ENST00000450966 OR6K2Q8NGY2 324 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 STYXQ8WUJ0 223 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 BRINP2Q9C0B6 783 aa12.69□□□□□ -0.38
USP40-208ENST00000450966 NEMP2A6NFY4 417 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 PMM2O15305 246 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 SLC7A4O43246 635 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 ADORA3P0DMS8 318 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 PIM1P11309 404 aaPredicted RBP12.68□□□□□ -0.38
USP40-208ENST00000450966 GGT1P19440 569 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 AVPR1BP47901 424 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 DUSP3P51452 185 aaPredicted RBP12.68□□□□□ -0.38
USP40-208ENST00000450966 CRISP1P54107 249 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 IL10RBQ08334 325 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 LASP1Q14847 261 aaKnown RBP12.68□□□□□ -0.38
USP40-208ENST00000450966 ADGRG3Q86Y34 549 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 IER2Q9BTL4 223 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 C11orf54Q9H0W9 315 aaPredicted RBP12.68□□□□□ -0.38
USP40-208ENST00000450966 BCO1Q9HAY6 547 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 LUZP4Q9P127 313 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 SLC35F4A4IF30 521 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 RHOP08100 348 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 KCNE1P15382 129 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 GIFP27352 417 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 CMPK1P30085 196 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 PBX3P40426 434 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 KIAA1024LP59773 190 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 CYBRD1Q53TN4 286 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 ZNF691Q5VV52 312 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 ADAMTS14Q8WXS8 1223 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 RAI2Q9Y5P3 530 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 ZNF587BE7ETH6 402 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 B4GAT1O43505 415 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 CAPNS1P04632 268 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 MAKP20794 623 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 GKP32189 559 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 MC1RQ01726 317 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 CACNG1Q06432 222 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 ALKBH2Q6NS38 261 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 ADAM5Q6NVV9 412 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 KCNIP4Q6PIL6 250 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 GPAT4Q86UL3 456 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 LRRC28Q86X40 367 aaPredicted RBP12.68□□□□□ -0.38
USP40-208ENST00000450966 MS4A15Q8N5U1 240 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 ZBTB2Q8N680 514 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 OR4C5Q8NGB2 326 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 TRMT10AQ8TBZ6 339 aaKnown RBP12.68□□□□□ -0.38
USP40-208ENST00000450966 MRI1Q9BV20 369 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 E7ESA3 106 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 SORBS2O94875 1100 aaKnown RBP12.68□□□□□ -0.38
USP40-208ENST00000450966 ZNF585AQ6P3V2 769 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 ADIPOR2Q86V24 386 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 XYLT1Q86Y38 959 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 SLC38A3Q99624 504 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 GPR21Q99679 349 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 PITHD1Q9GZP4 211 aaPredicted RBP12.68□□□□□ -0.38
USP40-208ENST00000450966 OR51I1Q9H343 314 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 KLK4Q9Y5K2 254 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 AFDNP55196 1824 aaKnown RBP12.68□□□□□ -0.38
USP40-208ENST00000450966 FGF7P21781 194 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 RBMS1P29558 406 aaKnown RBP12.68□□□□□ -0.38
USP40-208ENST00000450966 SSTR4P31391 388 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 GHRHRQ02643 423 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 ASAH1Q13510 395 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 KCT2Q8NC54 265 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 OSTF1Q92882 214 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 CCDC74AQ96AQ1 378 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 ARNT2Q9HBZ2 717 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 COQ4Q9Y3A0 265 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 NRXN3Q9Y4C0 1643 aa12.68□□□□□ -0.38
USP40-208ENST00000450966 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.67□□□□□ -0.38
USP40-208ENST00000450966 A0A1W2PS29 197 aa12.67□□□□□ -0.38
USP40-208ENST00000450966 RCBTB2O95199 551 aa12.67□□□□□ -0.38
USP40-208ENST00000450966 CDK2P24941 298 aa12.67□□□□□ -0.38
USP40-208ENST00000450966 MASP1P48740 699 aa12.67□□□□□ -0.38
USP40-208ENST00000450966 ART1P52961 327 aa12.67□□□□□ -0.38
USP40-208ENST00000450966 GLO1Q04760 184 aa12.67□□□□□ -0.38
USP40-208ENST00000450966 SP140Q13342 867 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms