RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 GXYLT2A0PJZ3 443 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 SLC16A5O15375 505 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 NRG3P56975 720 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 FXYD6P3P58550 94 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 CRY2Q49AN0 593 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 LRRC28Q86X40 367 aaPredicted RBP7.51□□□□□ -1.21
SMG1-202ENST00000446231 OLIG1Q8TAK6 271 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 HMGB4Q8WW32 186 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 AK6Q9Y3D8 172 aaKnown RBP7.51□□□□□ -1.21
SMG1-202ENST00000446231 ZNF768Q9H5H4 540 aaKnown RBP7.51□□□□□ -1.21
SMG1-202ENST00000446231 INPP5EQ9NRR6 644 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 ERVH48-1M5A8F1 160 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 YKT6O15498 198 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 PRAMEF12O95522 483 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 CBSLP0DN79 551 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 CBSP35520 551 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 ADH7P40394 386 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 PM20D1Q6GTS8 502 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 ZNF566Q969W8 418 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 OR2A14Q96R47 310 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 MED18Q9BUE0 208 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 GABARAPL1Q9H0R8 117 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 GOLGA2P5Q9HBQ8 144 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 AIPO00170 330 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 GNSP15586 552 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 HOXD10P28358 340 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 AQP2P41181 271 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 ANKK1Q8NFD2 765 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 ABHD4Q8TB40 342 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 KCTD12Q96CX2 325 aaKnown RBP7.5□□□□□ -1.21
SMG1-202ENST00000446231 SMOQ99835 787 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 NMNAT1Q9HAN9 279 aaPredicted RBP7.5□□□□□ -1.21
SMG1-202ENST00000446231 CFAP97Q9P2B7 532 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 MN1Q10571 1320 aaPredicted RBP7.5□□□□□ -1.21
SMG1-202ENST00000446231 ARF3P61204 181 aaPredicted RBP7.5□□□□□ -1.21
SMG1-202ENST00000446231 ARF1P84077 181 aaKnown RBP7.5□□□□□ -1.21
SMG1-202ENST00000446231 FAM86B1Q8N7N1 296 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 POMGNT2Q8NAT1 580 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 THSD1Q9NS62 852 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 GTPBP1O00178 669 aaKnown RBP7.5□□□□□ -1.21
SMG1-202ENST00000446231 TIA1P31483 386 aaKnown RBP eCLIP7.5□□□□□ -1.214e-7■■□□□ 14.2
SMG1-202ENST00000446231 ETV6P41212 452 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 ARRDC4Q8NCT1 418 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 USB1Q9BQ65 265 aaKnown RBP7.5□□□□□ -1.21
SMG1-202ENST00000446231 LYARQ9NX58 379 aaKnown RBP7.5□□□□□ -1.21
SMG1-202ENST00000446231 HYKKA2RU49 373 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 THOC6Q86W42 341 aaKnown RBP7.5□□□□□ -1.21
SMG1-202ENST00000446231 HRASLS5Q96KN8 279 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 STK25O00506 426 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 GNALP38405 381 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 ZNF565Q8N9K5 539 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 OR2L3Q8NG85 312 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 ACPTQ9BZG2 426 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 OR10H2O60403 315 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 CYB5AP00167 134 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 THEGLP0DJG4 465 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 C18orf63Q68DL7 685 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 METTL3Q86U44 580 aaKnown RBP7.5□□□□□ -1.21
SMG1-202ENST00000446231 SMOC2Q9H3U7 446 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 BABAM2Q9NXR7 383 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 KLHL9Q9P2J3 617 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 STBD1O95210 358 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 URODP06132 367 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 CSF1P09603 554 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 VIPR1P32241 457 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 POU4F2Q12837 409 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 ZNF789Q5FWF6 425 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 GALNTL5Q7Z4T8 443 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 GLB1L2Q8IW92 636 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 ZDHHC6Q9H6R6 413 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 XKRYO14609 159 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 OR1F1O43749 312 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 SELENOWP63302 87 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 ILF3Q12906 894 aaKnown RBP eCLIP7.5□□□□□ -1.214e-6■■□□□ 12
SMG1-202ENST00000446231 ABCA11PQ4W5N1 156 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 FRMPD2BQ6IN97 320 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 CREB3L4Q8TEY5 395 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 DUSP19Q8WTR2 217 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 TMEM39AQ9NV64 488 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 FBXL2Q9UKC9 423 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 LGALS8O00214 317 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 SIGLEC6O43699 453 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 NSG1P42857 185 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 OR3A2P47893 321 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 CCR6P51684 374 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 SP2Q02086 613 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 ZNHIT3Q15649 155 aaPredicted RBP7.5□□□□□ -1.21
SMG1-202ENST00000446231 TMEM205Q6UW68 189 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 OR51G2Q8NGK0 314 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 OR5W2Q8NH69 310 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 TTC9Q92623 222 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 CLMPQ9H6B4 373 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 OARD1Q9Y530 152 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 NAT2P11245 290 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 CBR1P16152 277 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 CSNK2A2P19784 350 aaPredicted RBP7.5□□□□□ -1.21
SMG1-202ENST00000446231 LNX2Q8N448 690 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 ASH2LQ9UBL3 628 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 GPR52Q9Y2T5 361 aa7.5□□□□□ -1.21
SMG1-202ENST00000446231 ELOA3DA6NLF2 546 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms