RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 INPP1P49441 399 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 WNT4P56705 351 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 ELOAQ14241 798 aaKnown RBP13.42□□□□□ -0.26
ERCC3-203ENST00000445889 LASP1Q14847 261 aaKnown RBP13.42□□□□□ -0.26
ERCC3-203ENST00000445889 WSCD2Q2TBF2 565 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 RNASE12Q5GAN4 147 aaKnown RBP13.42□□□□□ -0.26
ERCC3-203ENST00000445889 PRAMEF14Q5SWL7 426 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 PRAMEF13Q5VWM6 474 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 PARS2Q7L3T8 475 aaKnown RBP13.42□□□□□ -0.26
ERCC3-203ENST00000445889 BBS1Q8NFJ9 593 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 OR8D4Q8NGM9 314 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 SMPDL3AQ92484 453 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 NEURL3Q96EH8 262 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 SGPP1Q9BX95 441 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 MAN2C1Q9NTJ4 1040 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 TDP1Q9NUW8 608 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 TESQ9UGI8 421 aaKnown RBP13.42□□□□□ -0.26
ERCC3-203ENST00000445889 CLEC4AQ9UMR7 237 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 ZC3H12DA2A288 527 aaKnown RBP13.41□□□□□ -0.26
ERCC3-203ENST00000445889 PITPNM1O00562 1244 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 HYAL3O43820 417 aaPredicted RBP13.41□□□□□ -0.26
ERCC3-203ENST00000445889 PLOD3O60568 738 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 INHAP05111 366 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 CPEP16870 476 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 EVI2BP34910 448 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 SP3Q02447 781 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 ZNF730Q6ZMV8 503 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 PRR23CQ6ZRP0 262 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 PRICKLE2Q7Z3G6 844 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 METTL3Q86U44 580 aaKnown RBP13.41□□□□□ -0.26
ERCC3-203ENST00000445889 TMC8Q8IU68 726 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 CLDN22Q8N7P3 220 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 SLC43A3Q8NBI5 491 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 C16orf58Q96GQ5 468 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 FAM46AQ96IP4 442 aaKnown RBP13.41□□□□□ -0.26
ERCC3-203ENST00000445889 TRMT61BQ9BVS5 477 aaKnown RBP13.41□□□□□ -0.26
ERCC3-203ENST00000445889 ZNF717Q9BY31 904 aaPredicted RBP13.41□□□□□ -0.26
ERCC3-203ENST00000445889 SAP130Q9H0E3 1048 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 ZCCHC3Q9NUD5 404 aaKnown RBP13.41□□□□□ -0.26
ERCC3-203ENST00000445889 CPSF4LA6NMK7 179 aaKnown RBP13.41□□□□□ -0.26
ERCC3-203ENST00000445889 SLC30A4O14863 429 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 ARHGEF9O43307 516 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 ICMTO60725 284 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 OR2B3O76000 313 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 CRYZL1O95825 349 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 C8AP07357 584 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 TRAPPC2P0DI81 140 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 TRAPPC2BP0DI82 140 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 GPR1P46091 355 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 SLC7A9P82251 487 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 PCDH1Q08174 1060 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 SREBF2Q12772 1141 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 TMEM201Q5SNT2 666 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 TIGD4Q8IY51 512 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 LRRC56Q8IYG6 542 aaPredicted RBP13.41□□□□□ -0.26
ERCC3-203ENST00000445889 TMEM145Q8NBT3 493 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 SMAP2Q8WU79 429 aaPredicted RBP13.41□□□□□ -0.26
ERCC3-203ENST00000445889 ZNF558Q96NG5 402 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 MCOLN1Q9GZU1 580 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 DIMT1Q9UNQ2 313 aaKnown RBP13.41□□□□□ -0.26
ERCC3-203ENST00000445889 CLCA2Q9UQC9 943 aa13.41□□□□□ -0.26
ERCC3-203ENST00000445889 GPR55Q9Y2T6 319 aaPredicted RBP13.41□□□□□ -0.26
ERCC3-203ENST00000445889 GTPBP1O00178 669 aaKnown RBP13.4□□□□□ -0.26
ERCC3-203ENST00000445889 SOD1P00441 154 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 ATP6V1E1P36543 226 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 NTHL1P78549 312 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 DEFB103AP81534 67 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 PLK5Q496M5 336 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 MARCH9Q86YJ5 346 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 DNAJC5GQ8N7S2 189 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 FAM181AQ8N9Y4 354 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 SUN5Q8TC36 379 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 ZFAND1Q8TCF1 268 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 IRF7Q92985 503 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 C17orf62Q9BQA9 187 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 SLC23A2Q9UGH3 650 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 IL36AQ9UHA7 158 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 SF3B6Q9Y3B4 125 aaKnown RBP13.4□□□□□ -0.26
ERCC3-203ENST00000445889 CSNK1G3Q9Y6M4 447 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 ARRDC5A6NEK1 342 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 WASH3PC4AMC7 463 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 LYRM1O43325 122 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 LCMT2O60294 686 aaKnown RBP13.4□□□□□ -0.26
ERCC3-203ENST00000445889 LIMS3P0CW19 117 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 LIMS4P0CW20 117 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 HOXB3P14651 431 aaPredicted RBP13.4□□□□□ -0.26
ERCC3-203ENST00000445889 CPN2P22792 545 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 ERP29P30040 261 aaKnown RBP13.4□□□□□ -0.26
ERCC3-203ENST00000445889 MTNR1AP48039 350 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 GZMKP49863 264 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 GAS1P54826 345 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 CSTF1Q05048 431 aaKnown RBP13.4□□□□□ -0.26
ERCC3-203ENST00000445889 TEAD2Q15562 447 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 ZNF628Q5EBL2 1059 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 HSDL2Q6YN16 418 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 FAM26EQ8N5C1 309 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 BMPERQ8N8U9 685 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 OR4M1Q8NGD0 313 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 RASSF5Q8WWW0 418 aa13.4□□□□□ -0.26
ERCC3-203ENST00000445889 TIFAQ96CG3 184 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms