RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 MATN1P21941 496 aa16.17■□□□□ 0.18
SGCE-206ENST00000445866 TLE3Q04726 772 aa16.17■□□□□ 0.18
SGCE-206ENST00000445866 LASP1Q14847 261 aaKnown RBP16.17■□□□□ 0.18
SGCE-206ENST00000445866 DEFB109BQ30KR1 87 aa16.17■□□□□ 0.18
SGCE-206ENST00000445866 HLA-DQA1Q5Y7H0 255 aa16.17■□□□□ 0.18
SGCE-206ENST00000445866 RINLQ6ZS11 566 aa16.17■□□□□ 0.18
SGCE-206ENST00000445866 RNF130Q86XS8 419 aa16.17■□□□□ 0.18
SGCE-206ENST00000445866 CLEC1AQ8NC01 280 aa16.17■□□□□ 0.18
SGCE-206ENST00000445866 ELP5Q8TE02 316 aa16.17■□□□□ 0.18
SGCE-206ENST00000445866 THAP3Q8WTV1 239 aaPredicted RBP16.17■□□□□ 0.18
SGCE-206ENST00000445866 SLC9A6Q92581 669 aa16.17■□□□□ 0.18
SGCE-206ENST00000445866 MS4A4EQ96PG1 132 aa16.17■□□□□ 0.18
SGCE-206ENST00000445866 SH3GL1Q99961 368 aa16.17■□□□□ 0.18
SGCE-206ENST00000445866 TRIM8Q9BZR9 551 aa16.17■□□□□ 0.18
SGCE-206ENST00000445866 GPATCH2Q9NW75 528 aa16.17■□□□□ 0.18
SGCE-206ENST00000445866 CELSR3Q9NYQ7 3312 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 TRBV5-3A0A0A0MS03 114 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 ARGFXA6NJG6 315 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 TAF4O00268 1085 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 ATP5HO75947 161 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 SERPINA7P05543 415 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 PPIBP23284 216 aaKnown RBP16.16■□□□□ 0.18
SGCE-206ENST00000445866 ITPKBP27987 946 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 CRATP43155 626 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 PRIM2P49643 509 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 RRADP55042 308 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 PSME3P61289 254 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 RPS26P62854 115 aaKnown RBP16.16■□□□□ 0.18
SGCE-206ENST00000445866 RNF4P78317 190 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 Q0VFX4 171 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 CDC20Q12834 499 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 MYBPC3Q14896 1274 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.16■□□□□ 0.187e-15■■□□□ 14.4
SGCE-206ENST00000445866 MFSD12Q6NUT3 480 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 WDR53Q7Z5U6 358 aaPredicted RBP16.16■□□□□ 0.18
SGCE-206ENST00000445866 TMEM102Q8N9M5 508 aaPredicted RBP16.16■□□□□ 0.18
SGCE-206ENST00000445866 RBM15BQ8NDT2 890 aaKnown RBP16.16■□□□□ 0.18
SGCE-206ENST00000445866 OR5L2Q8NGL0 311 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 ZCCHC14Q8WYQ9 949 aaKnown RBP16.16■□□□□ 0.18
SGCE-206ENST00000445866 JADE3Q92613 823 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 GIMAP5Q96F15 307 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 ACTRT3Q9BYD9 372 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 LIN28AQ9H9Z2 209 aaKnown RBP16.16■□□□□ 0.18
SGCE-206ENST00000445866 FOLH1BQ9HBA9 442 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 ZNF223Q9UK11 482 aaPredicted RBP16.16■□□□□ 0.18
SGCE-206ENST00000445866 FRYQ5TBA9 3013 aa16.16■□□□□ 0.18
SGCE-206ENST00000445866 C2orf92A0A1B0GVN3 265 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 FXYD1O00168 92 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 PRKNO60260 465 aaPredicted RBP16.15■□□□□ 0.18
SGCE-206ENST00000445866 PSMG1O95456 288 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 ITGAMP11215 1152 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 MTPNP58546 118 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 VAC14Q08AM6 782 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 ZNF155Q12901 538 aaPredicted RBP16.15■□□□□ 0.18
SGCE-206ENST00000445866 AIMP2Q13155 320 aaKnown RBP16.15■□□□□ 0.18
SGCE-206ENST00000445866 ZNHIT3Q15649 155 aaPredicted RBP16.15■□□□□ 0.18
SGCE-206ENST00000445866 COX20Q5RI15 118 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 ZCCHC12Q6PEW1 402 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 PROSER1Q86XN7 944 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 C9orf40Q8IXQ3 194 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 CDRT4Q8N9R6 151 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 ADAMTS15Q8TE58 950 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 THOC3Q96J01 351 aaKnown RBP16.15■□□□□ 0.18
SGCE-206ENST00000445866 SLC35G5Q96KT7 338 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 GAL3ST4Q96RP7 486 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 GPATCH1Q9BRR8 931 aaKnown RBP16.15■□□□□ 0.18
SGCE-206ENST00000445866 ING2Q9H160 280 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 NDE1Q9NXR1 346 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 TAS2R1Q9NYW7 299 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 DTX4Q9Y2E6 619 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 L3MBTL1Q9Y468 752 aa16.15■□□□□ 0.18
SGCE-206ENST00000445866 SLC6A2P23975 617 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 GABRA3P34903 492 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 PPICP45877 212 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 AP2B1P63010 937 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 SELPLGQ14242 412 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 RGNQ15493 299 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 RABL3Q5HYI8 236 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 TNFAIP8L2Q6P589 184 aaPredicted RBP16.14■□□□□ 0.18
SGCE-206ENST00000445866 C16orf89Q6UX73 402 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 SLC16A11Q8NCK7 471 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 OR52N2Q8NGI0 321 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 OR8K3Q8NH51 312 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 FBXO30Q8TB52 745 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 XAGE5Q8WWM1 108 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 OTUB1Q96FW1 271 aaPredicted RBP16.14■□□□□ 0.18
SGCE-206ENST00000445866 VSTM2LQ96N03 204 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 ECSITQ9BQ95 431 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 CPPED1Q9BRF8 314 aaPredicted RBP16.14■□□□□ 0.18
SGCE-206ENST00000445866 WWTR1Q9GZV5 400 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 RAD21L1Q9H4I0 556 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 IKZF5Q9H5V7 419 aa16.14■□□□□ 0.18
SGCE-206ENST00000445866 A6NL46 340 aa16.14■□□□□ 0.17
SGCE-206ENST00000445866 DUXAA6NLW8 204 aa16.14■□□□□ 0.17
SGCE-206ENST00000445866 ALOX5P09917 674 aa16.14■□□□□ 0.17
SGCE-206ENST00000445866 OR12D1P0DN82 309 aa16.14■□□□□ 0.17
SGCE-206ENST00000445866 ITGA3P26006 1051 aa16.14■□□□□ 0.17
SGCE-206ENST00000445866 CPOXP36551 454 aa16.14■□□□□ 0.17
SGCE-206ENST00000445866 RASSF2P50749 326 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms