RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 HYAL4Q2M3T9 481 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 UGT3A2Q3SY77 523 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 CLYBLQ8N0X4 340 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 FAM109AQ8N4B1 249 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 ZNF808Q8N4W9 903 aaPredicted RBP13.55□□□□□ -0.24
USE1-202ENST00000445667 OR7G2Q8NG99 324 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 FAM76AQ8TAV0 307 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 SPPL2AQ8TCT8 520 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 AGR3Q8TD06 166 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 GFM2Q969S9 779 aaKnown RBP13.55□□□□□ -0.24
USE1-202ENST00000445667 ZFP64Q9NPA5 681 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 MIEF1Q9NQG6 463 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 RYDENQ9NUL5 291 aaKnown RBP13.55□□□□□ -0.24
USE1-202ENST00000445667 TNFRSF10DQ9UBN6 386 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 PRODH2Q9UF12 536 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 TRAF6Q9Y4K3 522 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 GTF3C1Q12789 2109 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 ANKRD33BA6NCL7 494 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 LRRC3CA6NJW4 275 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 PRSS44E7EML9 344 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 E9PLN8 166 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 NPIPB8E9PQR5 432 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 CTIFO43310 598 aaKnown RBP13.54□□□□□ -0.24
USE1-202ENST00000445667 PPM1BO75688 479 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 ABCB1P08183 1280 aaPredicted RBP13.54□□□□□ -0.24
USE1-202ENST00000445667 DRD5P21918 477 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 PRPH2P23942 346 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 ETV4P43268 484 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 PPICP45877 212 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 TMED10P49755 219 aaKnown RBP13.54□□□□□ -0.24
USE1-202ENST00000445667 NCBP2P52298 156 aaKnown RBP eCLIP13.54□□□□□ -0.24
USE1-202ENST00000445667 CDSNQ15517 529 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 RFTN2Q52LD8 501 aaPredicted RBP13.54□□□□□ -0.24
USE1-202ENST00000445667 EMC4Q5J8M3 183 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 SH2D4BQ5SQS7 431 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 SP5Q6BEB4 398 aaPredicted RBP13.54□□□□□ -0.24
USE1-202ENST00000445667 RPTNQ6XPR3 784 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 TRILQ7L0X0 811 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 EXOC3L1Q86VI1 746 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 DDIASQ8IXT1 998 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 FAM9CQ8IZT9 166 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 OR5M9Q8NGP3 310 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 TWIST2Q8WVJ9 160 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 OMA1Q96E52 524 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 HSPBAP1Q96EW2 488 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 METTL2AQ96IZ6 378 aaKnown RBP13.54□□□□□ -0.24
USE1-202ENST00000445667 ZIM3Q96PE6 472 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 DMRTA2Q96SC8 542 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 VKORC1Q9BQB6 163 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 CENPHQ9H3R5 247 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 LDAHQ9H6V9 325 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 EML4Q9HC35 981 aaKnown RBP13.54□□□□□ -0.24
USE1-202ENST00000445667 TAS2R7Q9NYW3 318 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 SENP1Q9P0U3 644 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 BAIAP2L1Q9UHR4 511 aa13.54□□□□□ -0.24
USE1-202ENST00000445667 BOKQ9UMX3 212 aaPredicted RBP13.54□□□□□ -0.24
USE1-202ENST00000445667 WBP11Q9Y2W2 641 aaKnown RBP13.54□□□□□ -0.24
USE1-202ENST00000445667 SPTBN1Q01082 2364 aaKnown RBP13.54□□□□□ -0.24
USE1-202ENST00000445667 A0A1B0GVC2 190 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 WDR91A4D1P6 747 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 PIP5K1BO14986 540 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 AKAP10O43572 662 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 TRIM3O75382 744 aaPredicted RBP13.53□□□□□ -0.24
USE1-202ENST00000445667 BCAS2O75934 225 aaPredicted RBP13.53□□□□□ -0.24
USE1-202ENST00000445667 GRNP28799 593 aaKnown RBP13.53□□□□□ -0.24
USE1-202ENST00000445667 CASP3P42574 277 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 MAN2A2P49641 1150 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 SMSP52788 366 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 CORO7P57737 925 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 DCAF7P61962 342 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 RPL38P63173 70 aaKnown RBP13.53□□□□□ -0.24
USE1-202ENST00000445667 PLCXD2Q0VAA5 305 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 ART3Q13508 389 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 GALNTL6Q49A17 601 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 GXYLT1Q4G148 440 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 CEP85LQ5SZL2 805 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 TMEM198Q66K66 360 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 ANKRD26P1Q6NSI1 321 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 XKRXQ6PP77 449 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 RNF165Q6ZSG1 346 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 NUDCD3Q8IVD9 361 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 RPRMLQ8N4K4 120 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 CLHC1Q8NHS4 586 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 HGDQ93099 445 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 PKNOX2Q96KN3 472 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 RILPQ96NA2 401 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 TSSK3Q96PN8 268 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 NODALQ96S42 347 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 SECISBP2Q96T21 854 aaKnown RBP13.53□□□□□ -0.24
USE1-202ENST00000445667 ANGPTL4Q9BY76 406 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 GLIPR2Q9H4G4 154 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 EXO5Q9H790 373 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 ZNF703Q9H7S9 590 aaPredicted RBP13.53□□□□□ -0.24
USE1-202ENST00000445667 FOLH1BQ9HBA9 442 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 PNPLA3Q9NST1 481 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 GIMAP2Q9UG22 337 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 ZDHHC2Q9UIJ5 367 aa13.53□□□□□ -0.24
USE1-202ENST00000445667 GPR55Q9Y2T6 319 aaPredicted RBP13.53□□□□□ -0.24
USE1-202ENST00000445667 TRGV5A0A0B4J1U4 118 aa13.52□□□□□ -0.25
USE1-202ENST00000445667 C2orf72A6NCS6 295 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms