RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 DENND3A2RUS2 1198 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 C15orf61A6NNL5 157 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 E2F3O00716 465 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 SURF4O15260 269 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 SIGLEC5O15389 551 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 FRAT2O75474 233 aaPredicted RBP3.43□□□□□ -1.86
LINC01004-201ENST00000445184 GMNNO75496 209 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 PRAMEF12O95522 483 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 CRYAAP02489 173 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 CD48P09326 243 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 PRSS56P0CW18 603 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 RRASP10301 218 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 CYP11B1P15538 503 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 IFNAR2P48551 515 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 SGSHP51688 502 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 METAP1P53582 386 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 BTG1P62324 171 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 CDKL1Q00532 357 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 LRRC74AQ0VAA2 488 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 RFTN1Q14699 578 aaPredicted RBP3.43□□□□□ -1.86
LINC01004-201ENST00000445184 RBBP5Q15291 538 aaKnown RBP3.43□□□□□ -1.86
LINC01004-201ENST00000445184 CARTPTQ16568 116 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 CDKN3Q16667 212 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 CLPPQ16740 277 aaPredicted RBP3.43□□□□□ -1.86
LINC01004-201ENST00000445184 HAGHQ16775 308 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 DCAF4L1Q3SXM0 396 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 NADK2Q4G0N4 442 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 HSP90AB3PQ58FF7 597 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 RTL6Q6ICC9 239 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 NIPAL3Q6P499 406 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 GOLGA7Q7Z5G4 137 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 CBWD2Q8IUF1 395 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 ARFGAP2Q8N6H7 521 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 TCEANCQ8N8B7 351 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 NFAM1Q8NET5 270 aaPredicted RBP3.43□□□□□ -1.86
LINC01004-201ENST00000445184 OR10T2Q8NGX3 314 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 OR2T3Q8NH03 318 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 RDH11Q8TC12 318 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 ZSCAN5AQ9BUG6 496 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 ZNF416Q9BWM5 594 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 AGPAT5Q9NUQ2 364 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 MED17Q9NVC6 651 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 DCAF16Q9NXF7 216 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 AATFQ9NY61 560 aaKnown RBP eCLIP3.43□□□□□ -1.86
LINC01004-201ENST00000445184 MRPS18CQ9Y3D5 142 aaKnown RBP3.43□□□□□ -1.86
LINC01004-201ENST00000445184 ZNF175Q9Y473 711 aa3.43□□□□□ -1.86
LINC01004-201ENST00000445184 ARHGEF28Q8N1W1 1705 aaKnown RBP3.43□□□□□ -1.86
LINC01004-201ENST00000445184 SF3B1O75533 1304 aaKnown RBP eCLIP3.43□□□□□ -1.86
LINC01004-201ENST00000445184 TMEM2Q9UHN6 1383 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 USP32Q8NFA0 1604 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 FBLL1A6NHQ2 334 aaKnown RBP3.42□□□□□ -1.86
LINC01004-201ENST00000445184 ANKRD30BLA7E2S9 258 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 A8MU76 341 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 G3V2L1 256 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 BLOC1S5-TXNDC5H3BN57 136 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 MCF2LO15068 1137 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 TNFSF12O43508 249 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 BUB3O43684 328 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 FGF17O60258 216 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 CDC123O75794 336 aaPredicted RBP3.42□□□□□ -1.86
LINC01004-201ENST00000445184 OR4F21O95013 312 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 MFN2O95140 757 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 NXPH4O95158 308 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 PCCBP05166 539 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 FHP07954 510 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 CALCBP10092 127 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 HNRNPA2B1P22626 353 aaKnown RBP3.42□□□□□ -1.86
LINC01004-201ENST00000445184 MTIF2P46199 727 aaKnown RBP3.42□□□□□ -1.86
LINC01004-201ENST00000445184 SLC1A6P48664 564 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 XGP55808 180 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 LINC01547P58512 204 aaPredicted RBP3.42□□□□□ -1.86
LINC01004-201ENST00000445184 RPL27P61353 136 aaKnown RBP3.42□□□□□ -1.86
LINC01004-201ENST00000445184 SNTB2Q13425 540 aaKnown RBP3.42□□□□□ -1.86
LINC01004-201ENST00000445184 SLC36A3Q495N2 470 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 LINC01620Q4KN68 170 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 NCR3LG1Q68D85 454 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 SULT1C3Q6IMI6 304 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 LEG1Q6P5S2 330 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 CASC1Q6TDU7 716 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 GDPD4Q6W3E5 623 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 EGFL6Q8IUX8 553 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 CENPLQ8N0S6 344 aaPredicted RBP3.42□□□□□ -1.86
LINC01004-201ENST00000445184 LIPHQ8WWY8 451 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 FUCA2Q9BTY2 467 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 CARD6Q9BX69 1037 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 MTHFD2LQ9H903 347 aaPredicted RBP3.42□□□□□ -1.86
LINC01004-201ENST00000445184 WDR76Q9H967 626 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 GDF3Q9NR23 364 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 YAE1D1Q9NRH1 226 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 ATAD3AQ9NVI7 634 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 RBM28Q9NW13 759 aaKnown RBP3.42□□□□□ -1.86
LINC01004-201ENST00000445184 BCAP29Q9UHQ4 241 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 IKBKGQ9Y6K9 419 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 RNF215Q9Y6U7 377 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 DDX49Q9Y6V7 483 aaKnown RBP3.42□□□□□ -1.86
LINC01004-201ENST00000445184 EHBP1L1Q8N3D4 1523 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 SYCP2Q9BX26 1530 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 UNC80Q8N2C7 3258 aa3.42□□□□□ -1.86
LINC01004-201ENST00000445184 FER1L5A0AVI2 2057 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms