RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 DYTNA2CJ06 578 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 CAPN14A8MX76 684 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 MRASO14807 208 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 S1PR1P21453 382 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 SOX18P35713 384 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 CPA2P48052 419 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 CCT3P49368 545 aaKnown RBP15.99■□□□□ 0.15
LIME1-202ENST00000444951 TP53BP2Q13625 1128 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 TERF2Q15554 542 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 EXT1Q16394 746 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 GTDC1Q4AE62 458 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 REP15Q6BDI9 236 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 ANGPTL8Q6UXH0 198 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 RNF111Q6ZNA4 994 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 APLFQ8IW19 511 aaPredicted RBP15.99■□□□□ 0.15
LIME1-202ENST00000444951 NUP43Q8NFH3 380 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 OR1N1Q8NGS0 311 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 RP9Q8TA86 221 aaKnown RBP15.99■□□□□ 0.15
LIME1-202ENST00000444951 ZNF721Q8TF20 911 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 THAP3Q8WTV1 239 aaPredicted RBP15.99■□□□□ 0.15
LIME1-202ENST00000444951 THAP4Q8WY91 577 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 RCN3Q96D15 328 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 CMTM5Q96DZ9 223 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 FER1L6-AS2Q96M78 137 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 OR10A5Q9H207 317 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 NEUROD4Q9HD90 331 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 SLC6A13Q9NSD5 602 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 ZCCHC3Q9NUD5 404 aaKnown RBP15.99■□□□□ 0.15
LIME1-202ENST00000444951 SLAMF8Q9P0V8 285 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 PTGFRNQ9P2B2 879 aa15.99■□□□□ 0.15
LIME1-202ENST00000444951 UTP20O75691 2785 aaKnown RBP15.99■□□□□ 0.15
LIME1-202ENST00000444951 SPTAN1Q13813 2472 aaKnown RBP15.99■□□□□ 0.15
LIME1-202ENST00000444951 RNF103-CHMP3A0A140T963 221 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 A6NL46 340 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 UPK1AO00322 258 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 AIM2O14862 343 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 EMC8O43402 210 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 PRKNO60260 465 aaPredicted RBP15.98■□□□□ 0.15
LIME1-202ENST00000444951 KCNH1O95259 989 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 CBX7O95931 251 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 CHI3L1P36222 383 aaPredicted RBP15.98■□□□□ 0.15
LIME1-202ENST00000444951 CASP9P55211 416 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 LRRC74AQ0VAA2 488 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 Q0VFX4 171 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 FUT7Q11130 342 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 STX5Q13190 355 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 DUSP8Q13202 625 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 GAB1Q13480 694 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 NFYCQ13952 458 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 DCAF10Q5QP82 559 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 FHL5Q5TD97 284 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 PLAG1Q6DJT9 500 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 TRPM8Q7Z2W7 1104 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 KBTBD2Q8IY47 623 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 CLEC1AQ8NC01 280 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 FBXO30Q8TB52 745 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 TSPEARQ8WU66 669 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 CTHRC1Q96CG8 243 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 FAM120BQ96EK7 910 aaKnown RBP15.98■□□□□ 0.15
LIME1-202ENST00000444951 VMP1Q96GC9 406 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 GAL3ST4Q96RP7 486 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 SLC35A5Q9BS91 424 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 YIPF4Q9BSR8 244 aa15.98■□□□□ 0.15
LIME1-202ENST00000444951 PAIP1Q9H074 479 aaKnown RBP15.98■□□□□ 0.15
LIME1-202ENST00000444951 A0A1W2PQ72 361 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 BBIP1A8MTZ0 92 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 A8MUI8 341 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 PLOD2O00469 737 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 PLOD3O60568 738 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 CBX6O95503 412 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 C1QCP02747 245 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 CLPSP04118 112 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 IGKV3-11P04433 115 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 ITGAMP11215 1152 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 UQCRC2P22695 453 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 ITGA3P26006 1051 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 TRPC1P48995 793 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 CLCN2P51788 898 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 RRADP55042 308 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 PRR5P85299 388 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 ZNF155Q12901 538 aaPredicted RBP15.97■□□□□ 0.15
LIME1-202ENST00000444951 RAPSNQ13702 412 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 CAPRIN1Q14444 709 aaKnown RBP15.97■□□□□ 0.15
LIME1-202ENST00000444951 HSDL2Q6YN16 418 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 WDR53Q7Z5U6 358 aaPredicted RBP15.97■□□□□ 0.15
LIME1-202ENST00000444951 DHDDSQ86SQ9 333 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 OR2L13Q8N349 312 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 TRIML2Q8N7C3 387 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 TEX19Q8NA77 164 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 APCDD1LQ8NCL9 501 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 OR7G1Q8NGA0 311 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 M1APQ8TC57 530 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 PNPT1Q8TCS8 783 aaKnown RBP15.97■□□□□ 0.15
LIME1-202ENST00000444951 OTUB1Q96FW1 271 aaPredicted RBP15.97■□□□□ 0.15
LIME1-202ENST00000444951 AURKBQ96GD4 344 aaPredicted RBP15.97■□□□□ 0.15
LIME1-202ENST00000444951 THOC3Q96J01 351 aaKnown RBP15.97■□□□□ 0.15
LIME1-202ENST00000444951 DEFB126Q9BYW3 111 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 LIN28AQ9H9Z2 209 aaKnown RBP15.97■□□□□ 0.15
LIME1-202ENST00000444951 ATP13A2Q9NQ11 1180 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms